Gene Tpau_3139 details

Gene Information

• Locus tag: Tpau_3139
• ID: 9157310
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 3248147
• End bp: 3248902
• Gene Length: 756 bp
• Protein Length: 251 aa
• Translation table: 11
• GC content: 68%
• Product: short-chain dehydrogenase/reductase SDR
• Protein accession: YP_003648065
• Protein GI: 296140822

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.295469
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGTGAAG TCGCCGTCGT CACTGGAGCG AGCAGTGGGA TCGGGGCCGC GACTGCGCGA 
CACCTCGTGC GCGCGGGATT CGACGTCGTG ATCGGGGCCC GCCGGCTCGA ACGCCTCGAA 
GACCTCAAGG CGCAGCTGGA AGCCGAGTTC CCCGAGCGGA TCGTGACCGC GCTGCCGCTG 
GATGTGACCG ACGTGGAGTC GGTGACGGCC TTCACCGACG CGATTCCCGC CGTCGACGTG 
CTCGTCAACA ATGCCGGCGG CGCCATCGGC ACCGAGACGA TCGACGCTGC GCACGAAGCG 
GACTGGCTGC GCATGTACGA CATCAACGTG CTGTCGATCC TGCGCGTCAC TCAGCGGTTG 
CTGCCCAAGC TGCGGCAGTC ACCGTCGGCC AGCGTGGTGA CCATCGGCTC CATCGCCGCC 
CACGAGGCCT ACGCCACGGG GGCCGGGTAC AACGCCGCGA AGTTCGGTGC GCGCGCCGTG 
ACCCGCGCCC TGCGGCTCGA ACTCAAGGGC GAGCCGATCC GGGTGATCGA GATCGACCCC 
GGGCTGGTCG AGACCGAGTT CTCGATCGTG CGGCTCCGCG GTGATGTGGA CGGGGCCGCC 
AAGGTCTACG AGGGTGTCGA CAATCTGCAC GCCGACGACA TCGCCGACGC CGTCACGTGG 
GCCGTGACCC GTCCCCCGCA CGTGAACATC GACAACATCA CGATCCTGGC GAGGGATCAG 
GTGAGCGCCC GCGACGTGCA CCGCAGGAAC GTCTGA 

 

Protein sequence

MSEVAVVTGA SSGIGAATAR HLVRAGFDVV IGARRLERLE DLKAQLEAEF PERIVTALPL 
DVTDVESVTA FTDAIPAVDV LVNNAGGAIG TETIDAAHEA DWLRMYDINV LSILRVTQRL 
LPKLRQSPSA SVVTIGSIAA HEAYATGAGY NAAKFGARAV TRALRLELKG EPIRVIEIDP 
GLVETEFSIV RLRGDVDGAA KVYEGVDNLH ADDIADAVTW AVTRPPHVNI DNITILARDQ 
VSARDVHRRN V