Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_3114 |
Symbol | |
ID | 9157285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 3224208 |
End bp | 3225158 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | hydroxymethylbutenyl pyrophosphate reductase |
Protein accession | YP_003648040 |
Protein GI | 296140797 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.252327 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTTCTG GCAAGCGCGT CCTGTTGGCC GAGCCGCGCG GCTACTGTGC CGGCGTCGAT CGAGCGGTGG AGACTGTCGA GAAGGCGCTC GAGAAGCACG GTGCCCCGGT GTACGTGCGG AAGGAGATCG TGCACAACCG GCACGTCGTC GAGACGCTGC AGGACAAGGG CGTGATCTTC GTCGACGAGA CCGACGAGGT GCCCGAGGGA TCTCTGTTGG TGTTCTCGGC GCACGGCGTC TCGCCGGCCG TGCACGCCGG TGCCGAACAG CGCAGCCTGC GCACCATCGA CGCCACCTGC CCGCTGGTCA CCAAGGTCCA CCAGGAGGCG AAGCGATTCG CCCGCGATGA TTTCGACATC CTGCTCATCG GCCATGAGGG ACACGAGGAG GTCGAGGGCA CGGCGGGCGA GGCACCTGAG CACGTGCAAC TCGTCGACGG CCCCGACGCC GTGGATGCGG TGCAGGTCCG CGACGAGGAG AAGATCGTCT GGCTCTCGCA GACCACGCTC TCGGTGGACG AGACCATGGA GACGGTGCGC CGGCTGCGCG AGAAGTTCCC CAAGCTGCAG GATCCGCCCA GCGATGACAT CTGCTACGCC ACCCAGAACC GGCAGGTCGC GGTGAAGGCG ATGGCGCCCG AGTGCGATCT GGTGATCGTG GTGGGCTCGC GGAATTCCTC GAACTCGGTG CGGCTGGTCG AGGTGGCCTT GCAGGCCGGC GCCCGCGCCG CGCACCTCAT CGACTTCGCC CGCGAGATCG ACCCGGCGTG GTTGGACGGC GTACAGACGG TCGGCATCAC CTCGGGCGCG TCGGTGCCCG AGATCTTGGT CAAGGGAGTC GTGGAGTACC TCGACGGGGA AGGCTTCCAC GATGTGAAGC CCGTGACCAC CGCGAACGAG ACTCTCGTCT TCGCGTTGCC TCGGGAGCTG CGCCCGCGCG CCAAGGCCTG A
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Protein sequence | MTSGKRVLLA EPRGYCAGVD RAVETVEKAL EKHGAPVYVR KEIVHNRHVV ETLQDKGVIF VDETDEVPEG SLLVFSAHGV SPAVHAGAEQ RSLRTIDATC PLVTKVHQEA KRFARDDFDI LLIGHEGHEE VEGTAGEAPE HVQLVDGPDA VDAVQVRDEE KIVWLSQTTL SVDETMETVR RLREKFPKLQ DPPSDDICYA TQNRQVAVKA MAPECDLVIV VGSRNSSNSV RLVEVALQAG ARAAHLIDFA REIDPAWLDG VQTVGITSGA SVPEILVKGV VEYLDGEGFH DVKPVTTANE TLVFALPREL RPRAKA
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