Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_3065 |
Symbol | |
ID | 9157236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 3179296 |
End bp | 3180126 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | helix-turn-helix domain protein |
Protein accession | YP_003647996 |
Protein GI | 296140753 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCACCC GCAACAACGC CGAACTGGCG CGCTTCCTGC GCACGCGTCG GGAGCAGGTG ACGCCGCAGC AGGTGGGGCT CCCGATGGGT GGGCGACGCC GAACCCCCGG GCTTCGTCGC GAGGAGGTCG CGGCGCGGGC CAATGTGGGA ACCACCTGGT ACACGTGGGT CGAGCAGGGC CGGGATGTGA ACCCGAGCCC GGAGGTGCTG TGCGCCGTGG CCGACGCCCT GCTGCTGGAT GCGGGGGAGC GAGATCACGT ACTGCGATTG GCCGGGCACC AGCCCGGTCC GCCGGTCGAC ACCGGCGCGG CCTCCGCGGT GCAGCCGGTG CTCGATGCGC TGCTGCCGAA CCCCGCCGTG GTACTCAACG CTCGCGGCGA CATGATCCGG TACAACCGCG CTTTCCGGTT CCTCATCACC GATGTCGAGG AGTTCGCGCC GGAGGACCGG AACTGCCTGT GGCTCGACTT CACCGACGAG CTGTGGCTGG GAGCCTACGC CGCGGATCGC CAGGAGCTGG AGGCAGTGGT GGCCCGAACG CGTGCGATCT ACGCCGACAG TCACGCCGAT CCCGCGTGGG AACCCCTGCT GGCCCGGTTG CGAGCGGCAT CCCCGCTGTT CGCCCAGCTG TGGCACGCGG GCCTGGTGCT GGACGCCGCC GATTGGGAGA AGACGATCCG CAATCCGCGG GTAGGTGAGC TGCACCTGCA GGTGAGTACC TTCAACCTGC GGGACCGGCC CTCATTGCGG ATGCTGACCT ACCTGCCGCG CGACGAACGC ACCCGCGAGC GACTCACGCG ACTGGTGCCG GCGGAGCACC GACAAGGCTG A
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Protein sequence | MATRNNAELA RFLRTRREQV TPQQVGLPMG GRRRTPGLRR EEVAARANVG TTWYTWVEQG RDVNPSPEVL CAVADALLLD AGERDHVLRL AGHQPGPPVD TGAASAVQPV LDALLPNPAV VLNARGDMIR YNRAFRFLIT DVEEFAPEDR NCLWLDFTDE LWLGAYAADR QELEAVVART RAIYADSHAD PAWEPLLARL RAASPLFAQL WHAGLVLDAA DWEKTIRNPR VGELHLQVST FNLRDRPSLR MLTYLPRDER TRERLTRLVP AEHRQG
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