Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_3061 |
Symbol | |
ID | 9157232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 3173505 |
End bp | 3174476 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | transcriptional regulator, LacI family |
Protein accession | YP_003647993 |
Protein GI | 296140750 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.111004 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGTTGG TCCACGTCGC GGAGACGGCC GGCGTCTCGC TATCGACGGC CTCGCACGCC TTCGGCATCG ACAAGCCGAT CAGCGAGGCC ACTCGCGCCC GCGTCCTCGC GGCCGCAGCC GAGCTCGGCT ATGAGGGCCC CGACCCCCGT GCCCGGTCGC TGCGCAGCGG CCGCACCGAG ATCATCGGGG TACAGATCGA CGACGAGGCC GGACGCGCCT TCCGAGATCC GGTGATCATC GGCATCCTGG ACGGAGTCAC CAGCGCTCTG GCGGACAGCC CCAATTCGGT TCTGTTGATA CCGGATTCGG TTCCTCCGGA GCGACTGCGC GCCCTTCCGG TCGACGGGGT GATCGCCGCG GGCTGTTCTC CGCACCTCGC CGCCTTGCGC GAAGCGATGG CGCGCCGGGA ACTCCCCGTG GTCACCGCCG GCGATCAAGT CGATGAGCTC GGCTGTGTGG GCGTCGAGAA TCGCGCCGCC ACCGCCCGGC TCACCGCGCA CCTGTCCGAC CTCGGACACC GCGCGGTAGG CATCGTCAAA CTCAGTCCGA GCACGGTCGA GGTCGCCCGG ACCGGTGCCG CACTCGCCGC CTACCCTGCG GCACCCTCGG TGTCCGCCGC GGACAGCACC ATCGACGAGG GAGTCCGGGC CGGCGGCGCG CTGCTCGACG GCAATCCCGG CCTCACCGCG ATCATCGCGC AATCCGATCT CCTCGCCGCC GGCGTCGTCC GCGCCGCGGA GAGCCGAGGA TTGCGAGTAC CCGAAGATCT CTCGGTCACC GGGTTCGACG GCATCCGAGT GGACGGATTC GCCCGCCGGC TCACCACGAT TCGGCAACCC CTGGTCGAGA TGGGACGCCT CGCCGCCGAA GCGGTGCTCG CCTCGCTCGA TGGTGCGCCG CTGCCCACCA CCGCCATGCC GGTGGAGCTC GTGCTCGGCG ATACCACCGG TCCGGCGCCT CAGCGGAGCT GA
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Protein sequence | MTLVHVAETA GVSLSTASHA FGIDKPISEA TRARVLAAAA ELGYEGPDPR ARSLRSGRTE IIGVQIDDEA GRAFRDPVII GILDGVTSAL ADSPNSVLLI PDSVPPERLR ALPVDGVIAA GCSPHLAALR EAMARRELPV VTAGDQVDEL GCVGVENRAA TARLTAHLSD LGHRAVGIVK LSPSTVEVAR TGAALAAYPA APSVSAADST IDEGVRAGGA LLDGNPGLTA IIAQSDLLAA GVVRAAESRG LRVPEDLSVT GFDGIRVDGF ARRLTTIRQP LVEMGRLAAE AVLASLDGAP LPTTAMPVEL VLGDTTGPAP QRS
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