| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_2969 |
|---|
| Symbol | |
|---|
| ID | 9157137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 3081207 |
|---|
| End bp | 3083390 |
|---|
| Gene Length | 2184 bp |
|---|
| Protein Length | 727 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | ribonucleoside-diphosphate reductase, alpha subunit |
|---|
| Protein accession | YP_003647904 |
|---|
| Protein GI | 296140661 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0677187 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCAA CCCAAGAAGA CCTCGCACCC TCCGTCAGCC AGTCCGGCGT CCACGCCGGT
CCGGGCGGCC ACTCCGAGCT CGACTTCCAC GCGCTCAACG CGATGCTGAA CCTGTACGAC
CGGGACGGCA ACATCCAGTT CGACAAGGAC CGAGAGGCGG CGCGGCAGTA CTTCCTGCAG
CACGTCAACC AGAACACGGT GTTCTTTCAC AACCTCGACG AGAAGCTCGA TTACCTCGTC
GAGGAGAACT ACTACGAGCC CGAGGTGCTG GACAAGTACA GCCGCGCCTT CGTCAAGAAC
CTCTTCGATG CCGCCTACGC CAAGAAGTTC CGGTTTCCCA CCTTCCTGGG CGCGTTCAAG
TACTACACCA GCTACACGCT GAAGACCTTC GACGGTAAGC GGTATCTGGA GCGCTTCGAG
GATCGTGTGT GCATGGTGGC GCTCACCCTC GCCGATGGCG ACGAGAAGCT GGCAACAAGC
CTGGTCGACG AGATCATCGC GGGCCGCTTC CAGCCGGCCA CCCCCACCTT CCTGAACTCG
GGCAAGAAGC AGCGTGGCGA GCCCGTCTCC TGCTTCCTGC TGCGCATCGA GGACAACATG
GAGTCGATCG GCCGCTCCAT CAACTCGGCG CTGCAACTGT CCAAGCGCGG CGGTGGAGTG
GCGCTGCTGC TCAGCAACAT CCGCGAGCAC GGCGCGCCGA TCAAGAAGAT CGAGAACCAG
AGCTCCGGCG TCATCCCGAT CATGAAGCTG CTGGAGGACT CCTTCAGCTA TGCCAACCAG
TTGGGCGCCC GCCAGGGCGC GGGCGCGGTG TACCTGCACG CGCACCACCC CGATATCTAC
CGCTTCCTCG ACACCAAGCG CGAGAACGCG GATGAGAAGA TCCGCATCAA GACGCTGAGT
CTCGGCGTGG TGATCCCCGA CATCACCTTC GAGCTGGCCA AGAACAACGA CGACATGTAC
CTGTTCTCGC CGTACGACGT GGAGCGCGTG TACGGGGTTC CCTTCGCGGA CGTCAACGTC
ACGGAGAAGT ACCACGAGAT GGTCGACGAC TCGCGGATCC GCAAGACCAA GATCAACGCC
CGCGAGTTCT TCCAGACGCT CGCCGAGCTG CAGTTCGAGT CGGGCTACCC GTACATCATG
TACGAGGACA CCGTGAACCG GGCGAACCCG ATCGCGGGCA AGATCACTCA CTCCAACCTG
TGCAGCGAGA TCCTGCAGGT GTCCACGCCG TCCACGTACA ACGACGACCT GTCCTATGCC
GAAATCGGCA AGGACATCTC GTGCAACCTG GGCTCGCTGA ACATCGCGAA GACCATGGAC
AGCCCCGACT TCGGCGCCAC CATCGAGACC GCGATCCGCG GCCTCACCGC GGTCTCGGAC
CAGACCGCCA TCACGTCGGT GCCGTCGATC GAGCACGGCA ACAACCTGAG CCATGCCATC
GGTCTGGGGC AGATGAACCT GCACGGCTAC CTCGCCCGTG AGCGCGTCTT CTACGGTTCG
GAGGAGGGCG TCGACTTCAC GAACATCTAC TTCTACACGG TGCTCTTCCA CGCGATCCGC
GCCTCGAACG CCATCGCACG GGAGCGCGGT CAGTCCTTCG GAGGCTTCGA GGACAGCAAG
TACGCGTCGG GCGAGTTCTT CGACAAGTAC ATCGATCAGG AGTGGAAGCC GGCCACCGAC
AAGGTGATCG GGTTGTTCGC CGACTCCGAG ATCCGCATCC CCACGCAGGA CGACTGGCGC
GCGCTCAAGG CCGATGTGCA GCAGTACGGT CTGTACAACC AGAACCTGCA GGCCGTGCCG
CCCACCGGTT CGATCAGCTA CATCAACCAC TCCACCAGCT CGATCCACCC CGTTGCGGCG
AAGATCGAGA TCCGCAAGGA GGGGAAGATC GGCCGCGTCT ACTACCCGGC GCCCTACATG
GACAACGACA ACCTGGAGTA CTACCAGGAT GCCTACGAGA TCGGGTACGA GAAGATCATC
GACACCTACG CCGCGGCCAC GCAGCACGTG GATCAGGGCC TGTCGCTGAC GCTGTTCTTC
AAGGACACCG CCACCACCCG CGATGTGAAC CGTGCCCAGA TCTACGCATG GCGCAAGGGG
ATCAAGACCC TGTACTACAT CCGCCTGCGG CAGATGGCGC TCGAGGGCAC TGAGGTCGAG
GGCTGCGTCA GCTGCATGCT GTAG
|
|---|
| Protein sequence | MTATQEDLAP SVSQSGVHAG PGGHSELDFH ALNAMLNLYD RDGNIQFDKD REAARQYFLQ
HVNQNTVFFH NLDEKLDYLV EENYYEPEVL DKYSRAFVKN LFDAAYAKKF RFPTFLGAFK
YYTSYTLKTF DGKRYLERFE DRVCMVALTL ADGDEKLATS LVDEIIAGRF QPATPTFLNS
GKKQRGEPVS CFLLRIEDNM ESIGRSINSA LQLSKRGGGV ALLLSNIREH GAPIKKIENQ
SSGVIPIMKL LEDSFSYANQ LGARQGAGAV YLHAHHPDIY RFLDTKRENA DEKIRIKTLS
LGVVIPDITF ELAKNNDDMY LFSPYDVERV YGVPFADVNV TEKYHEMVDD SRIRKTKINA
REFFQTLAEL QFESGYPYIM YEDTVNRANP IAGKITHSNL CSEILQVSTP STYNDDLSYA
EIGKDISCNL GSLNIAKTMD SPDFGATIET AIRGLTAVSD QTAITSVPSI EHGNNLSHAI
GLGQMNLHGY LARERVFYGS EEGVDFTNIY FYTVLFHAIR ASNAIARERG QSFGGFEDSK
YASGEFFDKY IDQEWKPATD KVIGLFADSE IRIPTQDDWR ALKADVQQYG LYNQNLQAVP
PTGSISYINH STSSIHPVAA KIEIRKEGKI GRVYYPAPYM DNDNLEYYQD AYEIGYEKII
DTYAAATQHV DQGLSLTLFF KDTATTRDVN RAQIYAWRKG IKTLYYIRLR QMALEGTEVE
GCVSCML
|
|---|
| |