Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_2943 |
Symbol | |
ID | 9157111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 3052256 |
End bp | 3053173 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | periplasmic binding protein |
Protein accession | YP_003647880 |
Protein GI | 296140637 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.382264 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGATGG TCGCGATGGC TGCCGCTGCG ATGGCCGCAG TGTCCGCATG CGGCGGCCAG GAGCCCATCC AGCAGCCCTT CGCCTCGATC GCGACGACCA CCACCCGACT CGCCTCGGCG AACATCATCG GGCTCGACCG CAAGGCGGAT CAGGCGTGCG CCGCTCCCCT CGCGGGCACC GCGGCCCCGG CCAGCATCGT CGTCGCGGAT CCGGATCTGC TCGATGGTCT CTGCGCCCTC GGCCTGCAGA ACCGGGTGAA GGCAGTGGGC GGCGCGGTCC CGTCGTATCT CGGCGGCACG CTCGCGAAGG TCCCGCAGCT CGGCGACGGT GCACAGGCGG ACCTGGTGGT GGGGACCGAC CGGTCGGGGG AGGCGAACCG CAGGGCTGGT CGTGCCGTTG TCGTGCCGTC CCCGAGCGCG GACTGGCGTC GCAGCTTCCT CGCGCTGGCC GATGCGGTGC GCTTGCCGGC CGAGGCGCGA AGTGTGCTGG ACCGCTATCA GCGGGACGTC GCCGACGCGA CGCTCAAGAT CGACGCCATC CACAACGTGG TCTCGCTCGT CCGGTTCACC GCCGACAAGC GGTCGTTGGC CGAGGGGACG GCGCCGCTGG CCGCTCAGGT GCTCTCGGAT CTGCGGGTGG CACGCCCCGA ACCGCAACGC AAGGCCGAGC CCGTGCTCAT GCGTGACGGT GATTTCTCCG CCGCCGAAGG CGACCTCATC TACGTGGGGT ATCAGGGCGA ACAGGGTCGC GACTTCGGCA TGGAGCAGAT GACCTCGAAG TCCTGGAAGG ACCTGCGCGC GGTGACCGCG AAGCGCCAGC TCCTGGTGGA GGACTCGTCG TGGTTCTCGG CGGGCGGCCC GGTGGCAGCC GGGATCGTGG TCCACGACGT CACGAACACC ATCAAAGCCT CATCCTGA
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Protein sequence | MRMVAMAAAA MAAVSACGGQ EPIQQPFASI ATTTTRLASA NIIGLDRKAD QACAAPLAGT AAPASIVVAD PDLLDGLCAL GLQNRVKAVG GAVPSYLGGT LAKVPQLGDG AQADLVVGTD RSGEANRRAG RAVVVPSPSA DWRRSFLALA DAVRLPAEAR SVLDRYQRDV ADATLKIDAI HNVVSLVRFT ADKRSLAEGT APLAAQVLSD LRVARPEPQR KAEPVLMRDG DFSAAEGDLI YVGYQGEQGR DFGMEQMTSK SWKDLRAVTA KRQLLVEDSS WFSAGGPVAA GIVVHDVTNT IKASS
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