Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_2886 |
Symbol | |
ID | 9157054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 2994976 |
End bp | 2996190 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | transposase IS111A/IS1328/IS1533 |
Protein accession | YP_003647823 |
Protein GI | 296140580 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.445924 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGAAGA GCGAAAGTCG TTGGTGGGTA GGGGTAGATG TTGGCAAGGA GTTCCACTGG ATGGCTGTCT GCGACGACGC CGGAAAGGTG ATCTCCTCTC GTAAGGTTGC CAACGATGAG GTCTCGATCG CTGCGGCGAT CACCGAAGTT GAATCTCGCG ATGGCACCGT GTCGTGGACG GTGGACCTGA CCACCACTTA CGCGACCCTC CTGCTGACGA TGCTCGCCGC AGCCGGGCAT TCCGTGCGGT ATCTGACTGG TCGCGCCGTC TGGCAGGCCT CGGCGATCTA CCGAGGCGGC GAGGCAAAGA GCGACGCCAA AGATGCGAGG GTTATCGCAG ACCAGGGGCG CATGCGGGGC GATGATCTTC CGCTGCTGCG CCCCAACGAT GACCTGGTCA CCGAGCTATC GATGCTCACC GCTCACCGTG AGGATCTGGT GGCCGACCGC ACCCGCACGA TCAATCGGCT GCGGCAGCAG CTGGTCGCCA TCAGTCCTGC GCTGGAGCGG GCTGCACAGC CTTCCACCGA TCGCGGGTGG ATCGCGCTTT TGGCCCGCTA CCAGCGGCCC CAGGCAATCC GCCGATCGGG GATCACACGG ATCACCCGAG TCCTAGCCGA TGCAGGGGTG CGGAACGCAG GTCCAATCGC CGAAGCCGCC GTCACCGCGG CTAAGGCGCA GTCGATTACC CTGCCCGGCG AGGCCATCGC CGCAGATCTG GTAGCCGAGC TTGCACAGGG GGTGATCGAC CTCGATAAGC GGATCAAGGC GGCCGACGCC GCCATCGAGG AACGGTTTCG CCGCCATCCG CTCGCCGAAG CGATTGTGAG CCTGCCCGGC ATGGGATTTC GCCTCGGCGC CGAATTTCTA GCCGCCGTCG GCGATACCTC ACGGATTCTC TCCGCAGATC ATCTCGCGTC GTGGGCCGGC CTCGCACCCG TCACGAAAGA CTCTGGCAAA CGGACCGGAC GCTTATGCAC GCCCCAGCGC TACCACCGCG GACTGCGCAG AGTGATGTAT CTGTCAGCGG TGAGCGCTGC TCGCTGGGAT CCCGCCGCCA AAGACTACTA CCAGCGAAAA CGCGCTCAGG GAAAGAAGCA CGTCCCCGCG ACTATTTGCC TGGCACGCCG CCGCGTCAAC GTGCTCTACG CCCTCATCCG CGACAACCGA ACCTGGCAGC CAGCCGCCCC GCAAATCACC GCGGCCGCCG CTTGA
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Protein sequence | MVKSESRWWV GVDVGKEFHW MAVCDDAGKV ISSRKVANDE VSIAAAITEV ESRDGTVSWT VDLTTTYATL LLTMLAAAGH SVRYLTGRAV WQASAIYRGG EAKSDAKDAR VIADQGRMRG DDLPLLRPND DLVTELSMLT AHREDLVADR TRTINRLRQQ LVAISPALER AAQPSTDRGW IALLARYQRP QAIRRSGITR ITRVLADAGV RNAGPIAEAA VTAAKAQSIT LPGEAIAADL VAELAQGVID LDKRIKAADA AIEERFRRHP LAEAIVSLPG MGFRLGAEFL AAVGDTSRIL SADHLASWAG LAPVTKDSGK RTGRLCTPQR YHRGLRRVMY LSAVSAARWD PAAKDYYQRK RAQGKKHVPA TICLARRRVN VLYALIRDNR TWQPAAPQIT AAAA
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