Gene Tpau_2622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2622 
Symbol 
ID9156783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp2722244 
End bp2724064 
Gene Length1821 bp 
Protein Length606 aa 
Translation table11 
GC content67% 
IMG OID 
ProductABC transporter transmembrane region 
Protein accessionYP_003647564 
Protein GI296140321 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.499231 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGGGC CCGGAAGCCG CGCGGCCACC GCAGGCGCTC CCGGCCAGAA GCCGATGACC 
TTCTGGCCCT CGCTCAAACG ATTGCTCGGC ATGCTCGAAT CGCAGCGTTC GGCCGTGGTC
GCCGCGGTCG TCCTCGCTGT GGGATCGGTG GTCGCGGCGG TGCTCGCGCC CAAGGTGATC
GGCTCTGCTG TCGACGCCAT CTACGACGGT TTCCTCAGTG CTCGGACGGG TGGTCCGGGG
ATCGACTTCG ACCGGGTCGG CACGATTCTT CTCTGGGTGG TCGCGCTGTA CATCGGCAGT
GCACTACTGC AGTACATCGA GGGCTACCTG CTCAACGGCG CCGTGCAGAG GGTGATGTAC
GAGCTGCGCC GCGACGTCGA GGAGAAGCTG AATCGGTTGC CGCTGAGCTA CTTCGACAAG
CAGCCCCGCG GCGAGTTGCT CTCCCGCGTG ACGAACGACA TCGACAACCT CGGGCAGTCG
CTCACCCAGG CCCTCGGGCA GCTGATCATC TCGGCGCTCA CCGTGATCGG TGTGCTGGTG
ATGATGCTGG TGGTCTCGCC GGTGCTCACT CTGGTCGCGA TCCTGGTGAT CCCGCTCGTC
GTGATCCTCA CCGGCCAGAT CATGAAGCGC AGCCAGAAAC ACTTCGTGGG CCAGTGGCAG
CACACCGGAG CCCTCAACGG TCAGGTGGAA GAGGCGTTCT CCGGGCATGC CCTGGTCACC
GTCTTCGGCC GCCGGGACGC GGTCAAGCAG CGTTTCGATG TGGAGAACGA CGCGCTGATG
ACGGCCAGCT ACAAGGCCCA GTTCCTGTCC GGCCTGGTGA TGCCGATCTC GATGTTCGTG
GGGAACCTGC AGTACGTCGC GATCTGCGTG GTCGGCGGTC TCCGGGTGGC ATCGGGCTCG
ATGTCGCTCG GCGACGTGAT CGCGTTCATC CAGTACTCGC GGCAGTTCAC CCAGCCGCTC
ACGCAGATGG CGTCGATGGT GAACCTGCTC CAGTCCGGCG TCGCCTCCGC CGAGCGCGTG
TTCACGGTGC TCGACGCCGA CGACGAGGTG GCGGATCAGG CCGGCGCGCT GCCCGTCCCC
ACCCGGGGCC GCGTCGCGTT CGAGGACGTC GCCTTCGGCT ACGACCCCGA CGAGCCGCTG
ATCGAGCACC TCGACCTGGT CGCCGAACCG GGCCGCACCG TCGCCATCGT CGGTCACACC
GGCGCGGGAA AGACCACCCT GGTCAACCTC ATCCTGAGGT TCTACGAATT GACCGGAGGC
CGGATCACGA TCGACGGCAC CGATATCGCG CAGGTGCGGC GAGCCGAGCT GCGCTCGAAG
ATCGGCATGG TGCTGCAGGA CACGTGGCTG TTCGAGGGCA CGATCGCCGA CAACATCCGG
TATGGCCGGC TCGACGCGAC CGACGAGGAG GTGCGGGCCG CGGCGAAGGC CACCTTCGTG
GACCGTTTCG TGCACTCGCT GCCGGACGGC TACGACACCG TCCTCGACGA CGAATCGGGC
AGTGCGTCCG CCGGCGAGCG CCAGCTCATC ACGATCGCTC GGGCGTTCCT GGCCGAACCG
GCAATTCTCA TTCTCGACGA GGCCACCAGC TCGGTAGACA CCCGCACCGA AGTCCTGTTG
CAGCGGGCCA TGCGCGCGCT GCGCGCTGAT CGCACGAGCT TCGTGATCGC GCATCGGCTT
TCGACCATCC GCGACGCGGA CGTCATCGTC GTGATGGATC ACGGGCGGAT CGTGGAACAG
GGAGCGCACG ACGAGCTGTT GGCCGCCGGC GGGGCCTATG CCCGGCTGTA CCGGGCCCAG
TTCGAAGGCG CCGAGATCTG A
 
Protein sequence
MTGPGSRAAT AGAPGQKPMT FWPSLKRLLG MLESQRSAVV AAVVLAVGSV VAAVLAPKVI 
GSAVDAIYDG FLSARTGGPG IDFDRVGTIL LWVVALYIGS ALLQYIEGYL LNGAVQRVMY
ELRRDVEEKL NRLPLSYFDK QPRGELLSRV TNDIDNLGQS LTQALGQLII SALTVIGVLV
MMLVVSPVLT LVAILVIPLV VILTGQIMKR SQKHFVGQWQ HTGALNGQVE EAFSGHALVT
VFGRRDAVKQ RFDVENDALM TASYKAQFLS GLVMPISMFV GNLQYVAICV VGGLRVASGS
MSLGDVIAFI QYSRQFTQPL TQMASMVNLL QSGVASAERV FTVLDADDEV ADQAGALPVP
TRGRVAFEDV AFGYDPDEPL IEHLDLVAEP GRTVAIVGHT GAGKTTLVNL ILRFYELTGG
RITIDGTDIA QVRRAELRSK IGMVLQDTWL FEGTIADNIR YGRLDATDEE VRAAAKATFV
DRFVHSLPDG YDTVLDDESG SASAGERQLI TIARAFLAEP AILILDEATS SVDTRTEVLL
QRAMRALRAD RTSFVIAHRL STIRDADVIV VMDHGRIVEQ GAHDELLAAG GAYARLYRAQ
FEGAEI