Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_2622 |
Symbol | |
ID | 9156783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 2722244 |
End bp | 2724064 |
Gene Length | 1821 bp |
Protein Length | 606 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | ABC transporter transmembrane region |
Protein accession | YP_003647564 |
Protein GI | 296140321 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.499231 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGGGC CCGGAAGCCG CGCGGCCACC GCAGGCGCTC CCGGCCAGAA GCCGATGACC TTCTGGCCCT CGCTCAAACG ATTGCTCGGC ATGCTCGAAT CGCAGCGTTC GGCCGTGGTC GCCGCGGTCG TCCTCGCTGT GGGATCGGTG GTCGCGGCGG TGCTCGCGCC CAAGGTGATC GGCTCTGCTG TCGACGCCAT CTACGACGGT TTCCTCAGTG CTCGGACGGG TGGTCCGGGG ATCGACTTCG ACCGGGTCGG CACGATTCTT CTCTGGGTGG TCGCGCTGTA CATCGGCAGT GCACTACTGC AGTACATCGA GGGCTACCTG CTCAACGGCG CCGTGCAGAG GGTGATGTAC GAGCTGCGCC GCGACGTCGA GGAGAAGCTG AATCGGTTGC CGCTGAGCTA CTTCGACAAG CAGCCCCGCG GCGAGTTGCT CTCCCGCGTG ACGAACGACA TCGACAACCT CGGGCAGTCG CTCACCCAGG CCCTCGGGCA GCTGATCATC TCGGCGCTCA CCGTGATCGG TGTGCTGGTG ATGATGCTGG TGGTCTCGCC GGTGCTCACT CTGGTCGCGA TCCTGGTGAT CCCGCTCGTC GTGATCCTCA CCGGCCAGAT CATGAAGCGC AGCCAGAAAC ACTTCGTGGG CCAGTGGCAG CACACCGGAG CCCTCAACGG TCAGGTGGAA GAGGCGTTCT CCGGGCATGC CCTGGTCACC GTCTTCGGCC GCCGGGACGC GGTCAAGCAG CGTTTCGATG TGGAGAACGA CGCGCTGATG ACGGCCAGCT ACAAGGCCCA GTTCCTGTCC GGCCTGGTGA TGCCGATCTC GATGTTCGTG GGGAACCTGC AGTACGTCGC GATCTGCGTG GTCGGCGGTC TCCGGGTGGC ATCGGGCTCG ATGTCGCTCG GCGACGTGAT CGCGTTCATC CAGTACTCGC GGCAGTTCAC CCAGCCGCTC ACGCAGATGG CGTCGATGGT GAACCTGCTC CAGTCCGGCG TCGCCTCCGC CGAGCGCGTG TTCACGGTGC TCGACGCCGA CGACGAGGTG GCGGATCAGG CCGGCGCGCT GCCCGTCCCC ACCCGGGGCC GCGTCGCGTT CGAGGACGTC GCCTTCGGCT ACGACCCCGA CGAGCCGCTG ATCGAGCACC TCGACCTGGT CGCCGAACCG GGCCGCACCG TCGCCATCGT CGGTCACACC GGCGCGGGAA AGACCACCCT GGTCAACCTC ATCCTGAGGT TCTACGAATT GACCGGAGGC CGGATCACGA TCGACGGCAC CGATATCGCG CAGGTGCGGC GAGCCGAGCT GCGCTCGAAG ATCGGCATGG TGCTGCAGGA CACGTGGCTG TTCGAGGGCA CGATCGCCGA CAACATCCGG TATGGCCGGC TCGACGCGAC CGACGAGGAG GTGCGGGCCG CGGCGAAGGC CACCTTCGTG GACCGTTTCG TGCACTCGCT GCCGGACGGC TACGACACCG TCCTCGACGA CGAATCGGGC AGTGCGTCCG CCGGCGAGCG CCAGCTCATC ACGATCGCTC GGGCGTTCCT GGCCGAACCG GCAATTCTCA TTCTCGACGA GGCCACCAGC TCGGTAGACA CCCGCACCGA AGTCCTGTTG CAGCGGGCCA TGCGCGCGCT GCGCGCTGAT CGCACGAGCT TCGTGATCGC GCATCGGCTT TCGACCATCC GCGACGCGGA CGTCATCGTC GTGATGGATC ACGGGCGGAT CGTGGAACAG GGAGCGCACG ACGAGCTGTT GGCCGCCGGC GGGGCCTATG CCCGGCTGTA CCGGGCCCAG TTCGAAGGCG CCGAGATCTG A
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Protein sequence | MTGPGSRAAT AGAPGQKPMT FWPSLKRLLG MLESQRSAVV AAVVLAVGSV VAAVLAPKVI GSAVDAIYDG FLSARTGGPG IDFDRVGTIL LWVVALYIGS ALLQYIEGYL LNGAVQRVMY ELRRDVEEKL NRLPLSYFDK QPRGELLSRV TNDIDNLGQS LTQALGQLII SALTVIGVLV MMLVVSPVLT LVAILVIPLV VILTGQIMKR SQKHFVGQWQ HTGALNGQVE EAFSGHALVT VFGRRDAVKQ RFDVENDALM TASYKAQFLS GLVMPISMFV GNLQYVAICV VGGLRVASGS MSLGDVIAFI QYSRQFTQPL TQMASMVNLL QSGVASAERV FTVLDADDEV ADQAGALPVP TRGRVAFEDV AFGYDPDEPL IEHLDLVAEP GRTVAIVGHT GAGKTTLVNL ILRFYELTGG RITIDGTDIA QVRRAELRSK IGMVLQDTWL FEGTIADNIR YGRLDATDEE VRAAAKATFV DRFVHSLPDG YDTVLDDESG SASAGERQLI TIARAFLAEP AILILDEATS SVDTRTEVLL QRAMRALRAD RTSFVIAHRL STIRDADVIV VMDHGRIVEQ GAHDELLAAG GAYARLYRAQ FEGAEI
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