Gene Tpau_2572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2572 
Symbol 
ID9156733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp2668354 
End bp2669073 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content71% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003647514 
Protein GI296140271 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.314261 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTGCA TGTCCGCCAC CAGCCCGCGC CGCGGGCGCC CGACGAAGGA CGACACGCAT 
TTGTCTCGGA CCTCGATCGT CGACGCGGCG CTGGCACTCA TCGACGCGGA AGGAATCGCG 
GCGGTCAGCA TGCGCACGGT GGGACGCTCG CTGGGGGTGG ATGCCAAGAG TCTGTATCAC 
CACGTCGCGG GCAAAGAACA GTTGCTCGAC GCCGTGGCCG AACGGCTGCT CGAGTCGGTC 
GAAGTCCACC GCCCCACGGG CGACGTGCGC GCCGACCTCC GAGCGAACTC ATGGGCATTC 
CGGAACGCCG CGATGGCGCA CCCCCGGGCC GCCAGTCTGT TCCTCACCCG GCGCGTGCAG 
ACCCTCGCCG GCCTCGGGCC CGCTCAGTCG GTGCTCGACG TGCTGCTCAC AGCCGGCTTC 
CCCGCTGATG AGGCCGTTCA CCTGTTGCGG TCACTGCTCG CCATCATGAT CGGGACGATG 
CTCCGCGAGG TGGAGTCCAC GCCGACCTTC GGGGAGACCG ACGATGACGC CATCGCCCAG 
CGCGAGGCCG CGCTCGCCGG CTCCGAGCTG TCCGCAGTAC GGCTCGTCGC GGCCGACCTC 
GCGCGGTACG ACCCGGAGAC GGAGTTCGAG TACATGGTCG ACCTGTGCGG TGACGCGGTG 
GTGGCCCGAT GGGAGCGGCG CCGCGCGGAG GAGGGCCGGG CGGAGGAGGG CCGGGCGTAA
 
Protein sequence
MTCMSATSPR RGRPTKDDTH LSRTSIVDAA LALIDAEGIA AVSMRTVGRS LGVDAKSLYH 
HVAGKEQLLD AVAERLLESV EVHRPTGDVR ADLRANSWAF RNAAMAHPRA ASLFLTRRVQ 
TLAGLGPAQS VLDVLLTAGF PADEAVHLLR SLLAIMIGTM LREVESTPTF GETDDDAIAQ 
REAALAGSEL SAVRLVAADL ARYDPETEFE YMVDLCGDAV VARWERRRAE EGRAEEGRA