| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_2534 |
|---|
| Symbol | |
|---|
| ID | 9156695 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 2625848 |
|---|
| End bp | 2627440 |
|---|
| Gene Length | 1593 bp |
|---|
| Protein Length | 530 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_003647476 |
|---|
| Protein GI | 296140233 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.928543 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGTA GGGGAACACG CAGCGGCAGC ACTCTCGGGC CCTATTCGAT CGGCCCGCTC
CTGGGCAGCG GCGGCATGGG TGAGGTGTAC CTCGCGCACG ACGAACGCCG AGACCGCGAT
GTGGCGCTCA AGCTCCTGCA CGTCTCGGCC TCCCAGGATC CGCAGTTCCG CGAGCGATTC
ACCCGGGAAT CGCAGACGGT GGCCCGGCTC TCCGATCCGC ACGTCATCCC GATCCACGAC
TTCGGCGAGA TCGACGGCGT GCTGTACATC GACATGCGGT TGGTCGAGGG GCGCAATCTG
TCCGAGGTGC TGCGCGACGG TCCGCTCCCG CCCGGCCGCG CCGTCGCCCT CGTCGATCAA
GTGGCCGGTG CACTCGACGC CGCACACGCC AAGGGGCTGG TGCATCGCGA CGTGAAGCCC
GCGAACATCG AGCTGACCGA CGCGGGCTTT CCCTACCTGC TCGATTTCGG TCTGGCAGTG
ACGGATACGC AGTCGCGGAT GACATCCGCC GGGATCTTCG TCGGATCGCA GGCCTATGCC
GCACCGGAGC GGTTCGACGG TGACTCGGCT ACCGTCGCGA GCGACGTGTA CTCGCTGACC
TGCGTCTTGT ACGAGGCACT CACCGGCCAT CCGCCGTACC GCGGTGGCAG CCTCGGCGCG
ATGGTGAAAC AACACCTCGC CTCGCCCATC CCACGGCCCT CCGCGGAAGC GGCCGTGCCA
CCCGCCATGG ACGAGGTGAT CGCTCGCGGG ATGGCGAAGG ATCCGGCAGC ACGATTCTCC
TCGTGCGGAG AACTCGCAGC GGCGGCACGT CGCGCAGTCG CCGGGGCCGG CCCCGGACCC
ACCGATTCGG TGGCCACGCA GATTCGCCCC GTCCCGGGCC GGTCCGACCC GACGGTGATC
TCTGCACCGC GACCGCGCAC CGTCACCTCC CCGCCGGCGG CTCCACCGCC GAGTTACCCG
GTCGCACCGT CATATCCACC GGCGGACCGT GCGCCGGCGA CACCGCCATC GCGCAGCCGG
ATGGTGCCGG TCCTCGCCGT GGTCGCTGCC GTCCTGGTCG GTGCGACCGC GGTTCTGGGC
TATCTGGCAC TCACCGACCG GCGATCATCG CCCGCCGCGA GCACGGCAAC GGTGACCGCC
TCCGCACCGT CGCAGACCAC GGCGGGGACG GCTGCGCAAG CGACCACACC GCCGACCACA
GCCCCGCAAG TCGACCCTCG CGTCGCGCTC CAGAGCCGCG CCGCCACCGA CCTTCCGGTC
GCCAAGGCGA CCCTGAACAA TCGGTGGGTC GCACAGCTCG CGTCGAAGTT CGCGGGTGCG
ACCGACGACG GGAAGACCTG GTACGAAGCC GATATCCTCG GCGAGATCGG CTACTTCGAC
CAGCGATTCG GCGATGTCCG GGTGCTCTTC AGCCCGGACT GGACCGTATT CAGCACCAAC
AAGATCTTCT GGGTACCCGT CTACGCCGGG CAGAGCTGGG ACACACCGGA TCCTGCCAAC
GGCTGGTGCC GCTCCCAAGG ACTCGATAAC GCGCACTGCT TCGCGAAGCT GATATCCGAT
ACCCGCGGGC CCGAGGGCAC CACCCAGAGG TGA
|
|---|
| Protein sequence | MSGRGTRSGS TLGPYSIGPL LGSGGMGEVY LAHDERRDRD VALKLLHVSA SQDPQFRERF
TRESQTVARL SDPHVIPIHD FGEIDGVLYI DMRLVEGRNL SEVLRDGPLP PGRAVALVDQ
VAGALDAAHA KGLVHRDVKP ANIELTDAGF PYLLDFGLAV TDTQSRMTSA GIFVGSQAYA
APERFDGDSA TVASDVYSLT CVLYEALTGH PPYRGGSLGA MVKQHLASPI PRPSAEAAVP
PAMDEVIARG MAKDPAARFS SCGELAAAAR RAVAGAGPGP TDSVATQIRP VPGRSDPTVI
SAPRPRTVTS PPAAPPPSYP VAPSYPPADR APATPPSRSR MVPVLAVVAA VLVGATAVLG
YLALTDRRSS PAASTATVTA SAPSQTTAGT AAQATTPPTT APQVDPRVAL QSRAATDLPV
AKATLNNRWV AQLASKFAGA TDDGKTWYEA DILGEIGYFD QRFGDVRVLF SPDWTVFSTN
KIFWVPVYAG QSWDTPDPAN GWCRSQGLDN AHCFAKLISD TRGPEGTTQR
|
|---|
| |