Gene Tpau_2427 details

Gene Information

• Locus tag: Tpau_2427
• ID: 9156587
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 2524080
• End bp: 2526242
• Gene Length: 2163 bp
• Protein Length: 720 aa
• Translation table: 11
• GC content: 66%
• Product: excinuclease ABC, B subunit
• Protein accession: YP_003647372
• Protein GI: 296140129

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCATTCG CGGCAGAGCA ACCAGTGGTG GCGCACTCCG AGCACCGCCC GATCGGTGAG 
ATCGAGCGCG CCTCGTCGGA GTTCCAGGTG GTCAGCGAGT ACGAGCCCGC GGGCGATCAG 
CCGCAGGCGA TCGAGCAACT CGCCGGCCGA CTGAACGCGG GTGAGCGGGA CGTCGTTCTG 
CTCGGCGCCA CCGGCACCGG CAAATCGGCC ACGACGGCGT GGCTGATCGA GAAAGTGCAG 
CGGCCCACCC TGGTGATGGC CCCGAACAAG ACGCTGGCCG CGCAGCTCGC GAACGAGCTG 
CGGGCGATGT TGCCGCACAA CGCCGTCGAG TACTTCGTCT CGTACTACGA CTACTACCAG 
CCCGAGGCGT ACATCGCGCA GACCGATACG TACATCGAGA AGGACAGTTC GATCAACGAC 
GACGTGGAGC GGTTGCGGCA CTCCGCCACC TCGTCGCTGC TGTCCCGCCG CGATGTCGTG 
GTCGTCGCAT CGGTCTCGTG CATCTACGGC CTCGGCACCC CGCAGAGTTA CCTCGACCGG 
TCGGTGCAGC TCGAAGTGGG CATGGAGGTC GACCGGGATG CCCTCCTGCG CCTGCTGGTG 
GACGTCCAGT ACACCCGCAA TGACATGGCG TTCACGCGCG GCAGTTTCCG GGTCCGGGGC 
GATACCGTCG AGATCATCCC GTCGTACGAG GAACTGGCCG TCCGGATCGA GTTCTTCGGA 
GACGAGGTCG AGGCGCTGTA CTACCTGCAC CCGCTCACCG GCGATGTGGT GCGGCAGGTC 
GAGAACCTAC GGATCTTCCC GGCCACCCAC TACGTGGCCG GACCCGAGCG GATGGCGCGG 
GCGATCGAGG GCATCGAGTC CGAGTTGGAG GAGCGGCTGG CGGAGTTCGA GCGGCAGGGG 
AAGCTGCTCG AGGCGCAGCG GTTGCGGATG CGCACCCAGT ACGACGTCGA GATGATGCGG 
CAGGTCGGAT TCTGTTCCGG GATCGAGAAC TACAGCCGGC ACATCGACGG CCGTGCGGCG 
GGATCGGCAC CGGCCACGCT GCTGGACTAC TTCCCCGAGG ACTTCCTCCT GGTGATCGAC 
GAGTCGCATG TCACCGTGCC CCAGATCGGC GCCATGTTCG AGGGTGACAC CTCACGCAAG 
CGCAACTTGG TCGACTTCGG ATTCCGGCTG CCGTCCGCAG TCGACAACCG GCCACTCACC 
TGGGAGGAGT TCACCGAGCG GGTGGGGCAG ACGGTGTACC TCTCCGCCAC CCCCGGCCAA 
TACGAGCTCG GCCAGTCCGG CGGCGAATTC GTCGAGCAGG TCATCCGGCC CACCGGCCTG 
GTCGATCCGC AGGTGGTGAT CAAGCCCACC AAGGGGCAGA TCGACGACCT CATGCACGAG 
ATTCGTGAGC GCACCGAGAA GGACGAACGC GTCCTGGTCA CCACCCTCAC CAAGAAGATG 
GCCGAGGATC TGACCGACTA TCTCCTGGAG GCGGGAATCC GGGTCCGCTA CCTGCACAGC 
GACATCGACA CGCTGCGTCG CGTCGAACTG CTCCGGCAAC TCCGGCTCGG CGAGTACGAC 
GTGCTGGTGG GCATCAATCT GCTCCGTGAG GGCCTCGACC TCCCCGAGGT CTCGCTGGTG 
GCGATCCTCG ATGCCGACAA GGAAGGATTC CTACGCTCCA CCACCTCGTT GATCCAGACC 
ATCGGGCGCG CCGCCCGCAA CGTCTCGGGC GAGGTGCACA TGTACGCCGA CAAGATCACC 
GATTCCATGC GCAATGCGAT CGACGAAACC GATCGCCGCC GCGAGAAGCA GATCGCCTAC 
AACACCGAGA TGGGCGTCGA TCCGCAGCCG TTGCGCAAGA AGATCGCCGA CATCCTCGAC 
CAGGTGTACA CGGAAGCGGA CGACACCGAG GCAGCGATCG GCGGCCCGGG CCGCAACGCC 
ACCCGTGGGC GCCGTGCCCA GGGCGAGCTG CGGTCGGCGT CGTCGGTCAG CGCAGGCATG 
TACGAAGGCG AGGACGTCAA GTCCATGCCG CGGGCCGAAT TGGCGGACCT GATCTCCGAA 
CTCACCGATC AGATGATGAA CGCCGCGCGG GAATTGCAGT TCGAGCTCGC AGGCCGGATC 
CGCGACGAGA TCGCCGACCT GAAGAAGGAA CTACGCGGAA TGGACGCCGC AGGCCTCACG 
TGA 

 

Protein sequence

MAFAAEQPVV AHSEHRPIGE IERASSEFQV VSEYEPAGDQ PQAIEQLAGR LNAGERDVVL 
LGATGTGKSA TTAWLIEKVQ RPTLVMAPNK TLAAQLANEL RAMLPHNAVE YFVSYYDYYQ 
PEAYIAQTDT YIEKDSSIND DVERLRHSAT SSLLSRRDVV VVASVSCIYG LGTPQSYLDR 
SVQLEVGMEV DRDALLRLLV DVQYTRNDMA FTRGSFRVRG DTVEIIPSYE ELAVRIEFFG 
DEVEALYYLH PLTGDVVRQV ENLRIFPATH YVAGPERMAR AIEGIESELE ERLAEFERQG 
KLLEAQRLRM RTQYDVEMMR QVGFCSGIEN YSRHIDGRAA GSAPATLLDY FPEDFLLVID 
ESHVTVPQIG AMFEGDTSRK RNLVDFGFRL PSAVDNRPLT WEEFTERVGQ TVYLSATPGQ 
YELGQSGGEF VEQVIRPTGL VDPQVVIKPT KGQIDDLMHE IRERTEKDER VLVTTLTKKM 
AEDLTDYLLE AGIRVRYLHS DIDTLRRVEL LRQLRLGEYD VLVGINLLRE GLDLPEVSLV 
AILDADKEGF LRSTTSLIQT IGRAARNVSG EVHMYADKIT DSMRNAIDET DRRREKQIAY 
NTEMGVDPQP LRKKIADILD QVYTEADDTE AAIGGPGRNA TRGRRAQGEL RSASSVSAGM 
YEGEDVKSMP RAELADLISE LTDQMMNAAR ELQFELAGRI RDEIADLKKE LRGMDAAGLT