Gene Tpau_2259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2259 
Symbol 
ID9156415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp2348530 
End bp2349909 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content69% 
IMG OID 
Productamine oxidase 
Protein accessionYP_003647207 
Protein GI296139964 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00770255 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGATG TTGATGTGAT CGTGGTGGGT GCGGGACTGG CGGGGCTATC CGCGGCGCGG 
GCGCTGGTTG CCGCGGGAAA GACCGTGCGC GTCCTGGAGG CGCGCGAGCG CGTAGGTGGC
CGCAATCTCG GCGGCGAGCT GAGCAATGGC GTCGCCGTCG AACTCGGCGG CCAGTGGATC
GGTCCCGACC AGAGCGCAGC GCGTGAGCTC ATCGCGGAGC TCGGACTCGC GCTGTATCCG
ACGTACGACG AGGGCGATGC CATCACCGTC ATCGACGGCC GCGTCGTGCG CTACAGCGAC
GAGAGCTTCG GCTTCCCCTC GACGACCCTC GCGGAAGTCG CTCGCCTGTG GACAGACCTG
GAGGGCCTTG CGGCCGGCGT CTCGCCCGCC GCGCCGTGGG AGGCCGCCGG TGCCGAGGAT
CTCGACCGGC ACAACGTCGA CACCTGGCTG TCCGCGAACA CCCACGATGA GCTCGCCCGC
TCCTTCTTCC GGATCATCGT GCCCGCCGTA TTCTCCGCGG AGACAGCCGA GCTTTCCCTC
CTTCACTTCC TCGCCTATAT CCGATCGGGC ACGAATCTCG CCACGCTCAT CGCCACCCGG
GGTGGAGCGC AGGACGCGCG GGTGGCTGGC GGCCCGCACC TGATCTCCGA GAAGATGGCC
GAGCAGCTCG GCGCCGCGGT GCAGCTGGGG GCCGTGGTCC GCACCATCAA CCACGACGAT
GCCGGCGTCA CGGTCAGTTA CGAGGCGGTG GACGGCGGCC CCGGTGCGAC GGTCAGCGCG
GACTCCGTGA TCGTGGCGAT CCCCCCGACG CTCGCCGGCC GGATCCGGTA CCTGCCGCCG
CTGCCCAGCG CCAGAGACGG TCTCACCCAG CAGATCCCCG CCGGGTCGGT GATCAAATTC
CAGGTCGGGT ACGCGAGACC GTTCTGGCGC GATCACGGAC TCAGCGGCTT CGTGATCAGT
CTCGACGACG CTTTCAATGT GGTTCTGGAC AATTCGCCCG CCGACGGTCG ATGCGGCGTA
TTGGCCGGTT TCCTCGAGGG CAGGCACGCG CGCGAGGCGG CGGCGCTCAC GGCCGAACAG
CGGCGTGCGC AGGTGATCGC ATCGCTTGTG AAGTACTTCG GCGAGGAGGC CGCCGACCCC
TTCGATGTGC TCGAACTCGA TTGGGCGGAC GAGGAATTCA CCCGCGGTTG CTATGGCGGA
CGGCTCGGCA GCGGGGTATG GACGCAGTTC GGTGCGGCGC TCGCCGCACC GGTCGGCCGT
ATTCACTGGG CGGGCGCAGA GACCGCGGAT CGGTGGAACG GGTACATGGA CGGCGCGATT
CGATCGGGGC GCCGCGCCGC AGCGAATATT CTATCCGCTG GGGGCGAGCC TTTACTGTAG
 
Protein sequence
MPDVDVIVVG AGLAGLSAAR ALVAAGKTVR VLEARERVGG RNLGGELSNG VAVELGGQWI 
GPDQSAAREL IAELGLALYP TYDEGDAITV IDGRVVRYSD ESFGFPSTTL AEVARLWTDL
EGLAAGVSPA APWEAAGAED LDRHNVDTWL SANTHDELAR SFFRIIVPAV FSAETAELSL
LHFLAYIRSG TNLATLIATR GGAQDARVAG GPHLISEKMA EQLGAAVQLG AVVRTINHDD
AGVTVSYEAV DGGPGATVSA DSVIVAIPPT LAGRIRYLPP LPSARDGLTQ QIPAGSVIKF
QVGYARPFWR DHGLSGFVIS LDDAFNVVLD NSPADGRCGV LAGFLEGRHA REAAALTAEQ
RRAQVIASLV KYFGEEAADP FDVLELDWAD EEFTRGCYGG RLGSGVWTQF GAALAAPVGR
IHWAGAETAD RWNGYMDGAI RSGRRAAANI LSAGGEPLL