Gene Tpau_2179 details

Gene Information

• Locus tag: Tpau_2179
• ID: 9156335
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 2273580
• End bp: 2274338
• Gene Length: 759 bp
• Protein Length: 252 aa
• Translation table: 11
• GC content: 70%
• Product: precorrin-4 C11-methyltransferase
• Protein accession: YP_003647128
• Protein GI: 296139885

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0645183
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACCGTCT ACTTCATCGG CGCAGGTCCC GGGGCACCTG ATCTACTGAC ACTGCGTGGC 
GCGGAACTGC TGGCCCGGTG CGCGGTGTGC CTCTACGCGG GTTCCCTCGT GCCCCAGGAG 
ATGCTGGATC GCTGCCCGTC GAGCGCCCGG TTGGTGAATA CGGCGCGGAT GCCGCTGGAC 
GACATCGTCT CCGAGATGGT GGCGGCGCAT CATGCGGGTC ACGATGTGGC ACGGCTGCAC 
TCGGGTGATA TGTCCCTGTA TTCGGCGTTC ACGGAGCAGG CGGCCCGGTT GGATGCAGCG 
GGCGTGCCCT ACCAGGTGAT CCCGGGGGTG CCGGCGTTCG CGGCGGCGTC CGCAGCGCTG 
CACCGGGAGC TGACGGTGCC GGGTGTGGGG CAGTCGCTTC TGGTGACCCG GGTATCAACG 
CTCTCGACCG ATATGCCCCC GGGGGAGGAC CTCGCGTCGC TCGCGGCCAC CGGTGTGACC 
CTGGCGCTCC ACCTGGCCGC CCATCGCGGC CCCGAGCTGA CGGCCGAACT GGTCCCGCAT 
TACGGTGCCG ACTGTCCGGT GGCGGTAGTG GCGTTCGCCA GCCGACCCGA GCAGCAGATC 
GTCCGGTGCC GTCTGGCCGA CCTCCCGCAG CGGCTCACGG AAGCCGGGAT CTCCAAGACC 
GCGGTCATCT TCGTCGGCCG TGTCCTCGAT GCCGAGACCG TCGTGGACAG CTATCTGTAC 
TCGGCCGCGC GACTCCGCGC GCCCGGGGCG AGCCATTGA 

 

Protein sequence

MTVYFIGAGP GAPDLLTLRG AELLARCAVC LYAGSLVPQE MLDRCPSSAR LVNTARMPLD 
DIVSEMVAAH HAGHDVARLH SGDMSLYSAF TEQAARLDAA GVPYQVIPGV PAFAAASAAL 
HRELTVPGVG QSLLVTRVST LSTDMPPGED LASLAATGVT LALHLAAHRG PELTAELVPH 
YGADCPVAVV AFASRPEQQI VRCRLADLPQ RLTEAGISKT AVIFVGRVLD AETVVDSYLY 
SAARLRAPGA SH