Gene Tpau_2177 details

Gene Information

• Locus tag: Tpau_2177
• ID: 9156333
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 2271680
• End bp: 2272450
• Gene Length: 771 bp
• Protein Length: 256 aa
• Translation table: 11
• GC content: 70%
• Product: short-chain dehydrogenase/reductase SDR
• Protein accession: YP_003647126
• Protein GI: 296139883

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.108863
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCGACG GTGCGGTGCT ACTGCTCGGT GGGCGCAGCG AGGTGGGCCT GGAGGTCGCG 
CGACGGATCG CACCCGGCCG CGATGTGGTG TTGGCCGCGC GCCGGTCGAG CGACCTCGAC 
GCGCAGATCG AGACGCTGCG AGCCGCGGGC GCCACCGGTG TCTTCCCGGT GGAGTTCGAC 
GCGGACCGGA CGGAGCAGCA CGGGCTGTTC CTCGACGAGG TCGCCGACCG GTTCGGGCGG 
ATCGGTGTGG CGATCGTTGC CTTCGGCATC CTCGGAGATC AGGCGCGGGC GGAGGCCGAT 
CCCACGCACG CGGTGCAGAT CGCGCAGACC GACTACGTGG CCCAGGTGTC GATCCTGTTG 
GGCCTGGCGA ACCTGGTGCG CGAGCAGGAC CAGCGCGCGG GTCGACGGGG CGCGATCATC 
GCGTTCAGTT CGGTGGCCGG GGTCCGGGTC CGGAAGGCGA ACTACGTATA CGGCAGCACG 
AAGGCAGGAC TCGACGGGTT CGTCCAGGGA TTCACGGATT CGTTGCACGG CTCCGGTATT 
CAGGTGCTGC TCGCTCGCCC AGGGTTCATC ATCGGCGCGA TGACCCGTGA CCTCATGGCC 
TCCGGCGTCA CACCCGCGCC GTTCAGCCGC ACTGCACCGC AGGTGGCCGA CGCGACCGTG 
AGGGCACTGC GCCGGGGACG GCGAGTGGTG TGGATTCCGC CGGTACTGCG CCCGCTGTAC 
GCGGGATTGC GGTTCGTGCC CCAGGCGGTG TGGCGGCGGT TGCCACGATG A 

 

Protein sequence

MPDGAVLLLG GRSEVGLEVA RRIAPGRDVV LAARRSSDLD AQIETLRAAG ATGVFPVEFD 
ADRTEQHGLF LDEVADRFGR IGVAIVAFGI LGDQARAEAD PTHAVQIAQT DYVAQVSILL 
GLANLVREQD QRAGRRGAII AFSSVAGVRV RKANYVYGST KAGLDGFVQG FTDSLHGSGI 
QVLLARPGFI IGAMTRDLMA SGVTPAPFSR TAPQVADATV RALRRGRRVV WIPPVLRPLY 
AGLRFVPQAV WRRLPR