| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_2154 |
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| Symbol | |
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| ID | 9156310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 2248954 |
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| End bp | 2251509 |
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| Gene Length | 2556 bp |
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| Protein Length | 851 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | FHA modulated ABC efflux pump with fused ATPase and integral membrane subunits |
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| Protein accession | YP_003647104 |
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| Protein GI | 296139861 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.288386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACTG ATACGGGCGT GCTGACCGTC ACCGTCGACG GCCAGACCCT CACCTTCGCG
CCGGGCAAGA CGGTCACCTT CGGGCGCACC CTGGAATCGG ATGTGACGAT CAACCATCCG
CTGGTGTCGC GCACGCACGC CGTCGCGTCC GCGACCCCCA CCGGGTGGGT GCTGACCGAT
CGCAGTACGA ACGGGGTTTT CGTCGCTGGG GTCCGGCGCC CGACGGTCGC GCTCAACGGG
ACGCAGACGC TGATGTTCGG GGATCCGCGG ACGGGTGCCG CGGTTTCCGT CGCCGCCCCC
GGGATGCTCC CGAATCCGTC CGGTGGTTCG GTGCCGTCGG CACCACCCGC GCAGCCGCGC
ACCCCGGCGG GACCGCACAC CGCACCGCCC TCGGGCAGCG CGGCGCAGCG CGTACCGTCG
GCACCGAAGC CCCTCCCGCC ACGGCAGCAA CAGCCACCGT CGAATCCCGG TCGGCCCGCC
GCTGCGTCCG CACCGATCGC GCGCCCGACC TCCGCTCCCG TCGCAGCACC GGGCGAACTC
GCGCCGCACC TGCGAGCCAT GGCCGGCAAC ACCGGTCTGT TCCAGGTGGC ACCGGTCTCG
GCACCGCAGG CCGCCGGTGG CCAGGTCACC ATCGGCCGCA CCCCGGACAA CGACCTCGTG
ATTCCCGACA TGCTGGTCTC CCGTCGTCAC GCGCGGCTGC TCACGGGACC ACAGGGCCTC
GTCGTCGAGG ATCTGCACTC GGCCAACGGC ACCCAGGTCA ACGGCCGCCG GATCACCGCC
CCCACCCTGT TGCGCAACGG CGACCTGGTG ACGGTCGGCA ACTCCGACCT CGTGGTCGAC
AACGGCCGGC TCACCCGGCC GCGACCGCAG GAGTTCGCCG GCGCAGGCCT TGCAGTGCAG
GGCATCACGC TCACTGTCGA GGGCAACAAG ACCCTGCTCA ACGGGGTCGA CTTCCGCGCC
GCGCCGGGCA CGCTGACGGC GGTGATCGGG CCCTCGGGTG CCGGCAAGTC GACGGTCTCG
CGTGTCGTCT CGGGCGCAGT GACGCCGACC GCCGGCCGTG TCGAATTCGA GGGTCGTGAT
GTGCACCGCG ATTACGACGC CATGCGCTCG CGCATCGGGA TGGTGCCGCA GGACGATGTG
CTGCACCGGC AACTCACCCT GCAGCAGGCG CTCGGTTACG CGGCGGAATT GCGACTGCCG
CCCGATATGT CGAAGGCGGA CCGTGAACAG GTGATCGACG GCGTGCTCGC CGAACTACAG
CTCACCGAGC ACAAGAAGAC CCGGGTCGAC CGACTCTCCG GCGGCCAGCG CAAGCGGGCC
TCGGTAGCGA TGGAACTGCT CACCGGCCCA TCGCTGCTGA TCCTCGACGA GCCCACCTCG
GGACTCGACC CGGCTCTGGA CCGGCAGGTG ATGCAGACGT TGCGGCGTCT CGCCGATGCC
GGCCGCGTGG TGATCGTGGT GACTCACTCG CTGACCCACA TCGACATGTG CGACCAGGTG
CTGCTGCTCG CCCCCGGCGG CAAGACGGCC TACTGCGGTT CGCCGAAGGG CGTCCAGGCG
GCGATGGGCA CATCCGATTG GGCCGAGATC TTCGACTTCG TCGCGAAGCA GCCCGATGTG
GCCTGGCAGC GGTACCGGTC GGCGCACCCC GCGCCACCGC CGCCCGCGCC CACCGGGGCG
CCGCCGACCC CGACGAAGGC ACCGAAGACC TCGACGCGCA AACAGCTCTC GGTGGTCGCG
CGCCGGCAGG TGCGGCTGAT CCTGGCCGAC CGTGGCTATC TCGTGTTCCT GCTCCTCATG
CCGATCGCAC TCGGTGGCAT CACCCTGCTG GTGCCCGCCG AACGCGGTCT CGCCGGAATG
GGACCGGGCG AGACCACGGG CGGACCCGCC ATGATCCTGG TGCTGCTGGT GGTGGGCGCC
TGCTTCATGG GAGCCGCACT GACCTCGCGC GATCTGGTGG GGGAACGGCC GATCTACCAG
CGCGAACGTG CCGTCGGATT GCGGCCCGCG GCGTATCTGT CGGCGAAGAC CGTGGTCTAC
TTCCTCGCTG CCACGATCCA GGCAGCGATC ATGATGGGCA TCGTGCTGTT CGGCGTCGAG
CGTCCGTCCA CACAGGGCGC GGTGCTCAAG AACGCCTCGA TCGAATTGAT CGTCGACATC
GCGGTGCTCG CCTGCGTGTC CACTCTGGTC GGCCTCCTGA TCTCCGCTCT TGCCAAGTCG
AGCGAGCAAG TGATGCCGAT GCTCGTCGTG GTGATCATGG TGCAGTTGGT GATGAGCGGC
GGTCTGTTCG GGCTGCACGG TCGCGCCGGG CTGGAGCAGA TCTCCTGGCT GTTCCCATCG
CGGTGGGGTT TCGCAGCGAG CGCGTCGACG ATCGATCTGC AGAAGGTGAG TTCGATCCCC
GATCCGACGA ATCCAGCGCT GCTCAAGCCG ACGTCCGTTG ATCCGCTGTG GGATCCCTCT
CCGGCGAACT GGGCTCTGGC GATCGGTGCG CTCGTCGTGA TGGCCGCCGC GTTCTGGGCG
GCGACCTGGT TCCGGATCTC GCGGAAGTCG TCCTGA
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| Protein sequence | MSTDTGVLTV TVDGQTLTFA PGKTVTFGRT LESDVTINHP LVSRTHAVAS ATPTGWVLTD
RSTNGVFVAG VRRPTVALNG TQTLMFGDPR TGAAVSVAAP GMLPNPSGGS VPSAPPAQPR
TPAGPHTAPP SGSAAQRVPS APKPLPPRQQ QPPSNPGRPA AASAPIARPT SAPVAAPGEL
APHLRAMAGN TGLFQVAPVS APQAAGGQVT IGRTPDNDLV IPDMLVSRRH ARLLTGPQGL
VVEDLHSANG TQVNGRRITA PTLLRNGDLV TVGNSDLVVD NGRLTRPRPQ EFAGAGLAVQ
GITLTVEGNK TLLNGVDFRA APGTLTAVIG PSGAGKSTVS RVVSGAVTPT AGRVEFEGRD
VHRDYDAMRS RIGMVPQDDV LHRQLTLQQA LGYAAELRLP PDMSKADREQ VIDGVLAELQ
LTEHKKTRVD RLSGGQRKRA SVAMELLTGP SLLILDEPTS GLDPALDRQV MQTLRRLADA
GRVVIVVTHS LTHIDMCDQV LLLAPGGKTA YCGSPKGVQA AMGTSDWAEI FDFVAKQPDV
AWQRYRSAHP APPPPAPTGA PPTPTKAPKT STRKQLSVVA RRQVRLILAD RGYLVFLLLM
PIALGGITLL VPAERGLAGM GPGETTGGPA MILVLLVVGA CFMGAALTSR DLVGERPIYQ
RERAVGLRPA AYLSAKTVVY FLAATIQAAI MMGIVLFGVE RPSTQGAVLK NASIELIVDI
AVLACVSTLV GLLISALAKS SEQVMPMLVV VIMVQLVMSG GLFGLHGRAG LEQISWLFPS
RWGFAASAST IDLQKVSSIP DPTNPALLKP TSVDPLWDPS PANWALAIGA LVVMAAAFWA
ATWFRISRKS S
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