Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_2101 |
Symbol | |
ID | 9156256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 2189832 |
End bp | 2190596 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003647052 |
Protein GI | 296139809 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.608039 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGCAG GTCAGCCGCT CCACCATCGC CTCGCGGCGG AGTTCCGCGG TCGGATCGCC GCGGGCACCT GGCCCGAGGG TCAGCAGGCG CCGAGCGAGG CGGCGTTATG CGAGGAGTTC GGAACCTCGC GCGGCCCGGT GCGACAAGCG CTTGCGACGC TCCGTGCCGA GGGACTCATC GTCGGAGGTC AAGGTCGATC ACCGGTGGTG CGCCGGAATG TGGCCAGCCA CTCCGCCAGT GCCCTGGGCT CGTTCACGGC GTGGGCCCGC GAACACGGCC GTGAACCGGG CCAGCGCACC ACATTGCAGG CGCGAGTGCC GGCCTCGGCG GAACTTGCCG AGCGCCTACA GATCGAGCCG GGGGAGCCCG TGCTCGCGCT CCGTCGAGTG CGCACCCTGG ACGGCGCGCC TGCGCTCCGG GAGGAGATGT ATTTCGTCTG GGACCTGGGA CGTCAGTTGA TGGAGTTCGA CCCGGATTCC GGCTCGGTGA ACCGTTTCCT GCTCGACCGG GGAGCCGATC TTTTCGCCTC CACCCACCGA CTCGACGCCG TGGCGGCGAC CGCCGACGAT GCGGCCGATC TTCTCCTCGC CGAGGGAGCG CCGTTGCTGC GCGTGCGGCG CACCACCACG GATTCCGCGG GCGACATCGT CGAATACTCC GAGGACAGGT ACGTGCCCGG CGTGACCACC GTGACCGTCG AGAACCGTCT CTTCGCAGCC CCGAACGCAG CGCTGCGATC CGTCGCCGTC AGGAGAAACG CATGA
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Protein sequence | MSAGQPLHHR LAAEFRGRIA AGTWPEGQQA PSEAALCEEF GTSRGPVRQA LATLRAEGLI VGGQGRSPVV RRNVASHSAS ALGSFTAWAR EHGREPGQRT TLQARVPASA ELAERLQIEP GEPVLALRRV RTLDGAPALR EEMYFVWDLG RQLMEFDPDS GSVNRFLLDR GADLFASTHR LDAVAATADD AADLLLAEGA PLLRVRRTTT DSAGDIVEYS EDRYVPGVTT VTVENRLFAA PNAALRSVAV RRNA
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