| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_2099 |
|---|
| Symbol | |
|---|
| ID | 9156254 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 2187472 |
|---|
| End bp | 2188503 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | extracellular solute-binding protein family 1 |
|---|
| Protein accession | YP_003647050 |
|---|
| Protein GI | 296139807 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.603993 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATCA ACCGTTCTCT CACCGCGGCG GTGGCCGTCG CCACCGTGCT TGCGGCCACC
GCCTGCGGGG GCACCGGCGG CGGTTCCGGA TCCGGTGATT CCGTCACCGT GTACAGCGCC
GACGGTCTCG GCGACTGGTA CAAGGCCGAA TTCGCCGACT TCACCAAGCG AACCGGCATC
ACGGTCGCTC TGGTCGAAGC CGGTTCGGGA GAGGTGATCT CGCGCGCGCA GAAGGAGAAG
TCGAATCCGC AGGTCGATGT GCTCGTCACT CTCCCGCCGT TCATCCAGCA GGCGCACCAG
CAGGGCTCAC TCGCGCCCTC CGGCGTCGAT ACGGGTTCCG TTCCGGCCGA ACTGAAGTCG
AATGACGGTA CCTATGTGGC CGTGGTCAAC AACTACTTCG CGATGATCCG TGGCACCGCT
GCGCTTCCCA AGCCTGCCGA CTGGGCGGAG TTGACCGGCC CGGCGTACAA GCAGAAGATC
CAGTACTCCA CCCCGGGAAA GGCGGGCGAT GGCACCGCGC TCCTCCTTCT GCTCCAGCAG
ATCATGGGCA AGGAGGGCGC GCTCGCGTAC CTCGCCGAGC TGCAGACGAA CAACGTGGGA
CCGTCGACAT CCACGGGCAA GCTCGGACCG AAGGTCTCGA AGGGCGAACT GAGCGTGGCC
AACTCGGATG TGCAGATGGC GCTCGCCGCC ATCGCCGCCG ACAAGGTGGC CTACGAAGTG
TTCTACCCGG CCTTCGGGGG CAAACGCAGC ACGCTCCCTC TGCCGTACTT CATGGGGCTG
GCGGCTCAGG CACCGCATGC CGCGAACGGG ACCAAGCTCA TGGAGCACCT GCTGTCGAAG
CAGACCCAGC AGAACATCCC CGCCCGCGCC TGGGGTGCCC CGGTGCGCAC CGATGTCACC
CCGTCGGGCC AGCAGTGGGA CGCTTTCCGC GCCGCTATCG ACGGCGTCGA GATCTGGTAC
CCGAACTGGG ATCAGGTGCT CAGCGGTCTC GACGCCGATA TCAAGGCCTA CGAGAAGGCG
ACCGGCCAGT GA
|
|---|
| Protein sequence | MRINRSLTAA VAVATVLAAT ACGGTGGGSG SGDSVTVYSA DGLGDWYKAE FADFTKRTGI
TVALVEAGSG EVISRAQKEK SNPQVDVLVT LPPFIQQAHQ QGSLAPSGVD TGSVPAELKS
NDGTYVAVVN NYFAMIRGTA ALPKPADWAE LTGPAYKQKI QYSTPGKAGD GTALLLLLQQ
IMGKEGALAY LAELQTNNVG PSTSTGKLGP KVSKGELSVA NSDVQMALAA IAADKVAYEV
FYPAFGGKRS TLPLPYFMGL AAQAPHAANG TKLMEHLLSK QTQQNIPARA WGAPVRTDVT
PSGQQWDAFR AAIDGVEIWY PNWDQVLSGL DADIKAYEKA TGQ
|
|---|
| |