Gene Tpau_2089 details

Gene Information

• Locus tag: Tpau_2089
• ID: 9156244
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 2178788
• End bp: 2179555
• Gene Length: 768 bp
• Protein Length: 255 aa
• Translation table: 11
• GC content: 68%
• Product: hypothetical protein
• Protein accession: YP_003647040
• Protein GI: 296139797

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.0056958
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCGGCC CTCGTACCGC GATTCTCGCC GCATCGGCGG TACCCGGGGT GGACGGGACC 
GTCATCGCCC CCGCCGAGGT GACCTCGGCG CGATTTCATC AGGATCGCGA CGCGTGGTCA 
CTGACGACGG CCTCCGGCTC CTCCGATTAC GACGTGATCG TGCTGGCCGA TGCCGGACTG 
CGGATCGACG TTCCCACTCT GGATCCACGG GTCGCTCCGC CGCTCTCGGT GGGGCCTGAC 
AATGCCGACC GTGCATACCT GGGCATGCTG ATCGACGGTG TCCCGAATCT GGTCCTGCTC 
GCAGGAGCGC CGCAACGGAA GGCGCAGATC GCGACGCTGC AGACCTGGCT GCGATGGGCG 
TACGCAGAAC AGGCGACTCG TCTGATGTCG CGGCCACCGG TCACCGCCCG GTGGATCGGC 
AAGGGTCGCC GCAATCCAGC GAAACCGGAC CGCGATGCGG TCGACCTGTC GAACGAGCAC 
ATCCGCGACG AGGGCGTCTA CGCCGGCGAA GCGGTGCTCC GATCCGGCGA TTACGAGGCC 
ACCTCACCGG TGCGCCTGGC CGGACACCTC GAACCTCTTG ACGGCAACTA CCACTGGTAC 
GGCACCGTCG ACGATCTGGA GATCGGTGCG GCACTGAAGA AGATGCCCCG CGGCAGCGTC 
ACCGTGGCGG TGGGCGACGG CGACGGCAGC CCTGCGCTGG TCACCGATAA GACCGTCTGG 
GGTACCTACC GGCTCGTCGG AGTCGGTGCC CCGCCTTTCC CGCTGTAG 

 

Protein sequence

MSGPRTAILA ASAVPGVDGT VIAPAEVTSA RFHQDRDAWS LTTASGSSDY DVIVLADAGL 
RIDVPTLDPR VAPPLSVGPD NADRAYLGML IDGVPNLVLL AGAPQRKAQI ATLQTWLRWA 
YAEQATRLMS RPPVTARWIG KGRRNPAKPD RDAVDLSNEH IRDEGVYAGE AVLRSGDYEA 
TSPVRLAGHL EPLDGNYHWY GTVDDLEIGA ALKKMPRGSV TVAVGDGDGS PALVTDKTVW 
GTYRLVGVGA PPFPL