Gene Tpau_2064 details

Gene Information

• Locus tag: Tpau_2064
• ID: 9156219
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 2149777
• End bp: 2153139
• Gene Length: 3363 bp
• Protein Length: 1120 aa
• Translation table: 11
• GC content: 70%
• Product: hypothetical protein
• Protein accession: YP_003647015
• Protein GI: 296139772

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.203107
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACGCGAC GCCACCTCGG CCAGTACCGC CTCACCCGCC TGCAGGTGGT GAACTGGGGC 
ACCTTCGACG GCTACAAGGA CTTCCCCATC GACGAGCGCG GGGTGATCCT CACGGGCCCC 
TCGGGTTCGG GCAAGAGTTC GCTGATGGAC GCGCACTCGG TGGTCCTGCT CCCCACCTAC 
GACCAGTCCT TCAACGCCTC GGCGGATATG ACGGCGAAGG GCGCCAAACG TGCCGCCCGA 
TCGATGGCCG ACTACGTGCG CGGCGCCTGG TCGGTCAACG ATGACGAGCA CCAGCAGTCC 
AAGGTGCAGT ATCTGCGCGG AGATTCGGCC ACCTGGTCAG CGGTCGCCGC GACCTATGAC 
AACGGCGCGG GCACCGTGAC CACCGCGGTG GCGGTGAAGT GGTTCGCCGG TTCCGGCACC 
GACGGTTCCT CACTGAAGTC CTGGTACCAC CTGCACTCGG GCCCCTTCGA TCTGCTCGAC 
TTGCAGGACT GGGCGACTGC GGGCTTCGAC ACCCGCGGCT GGCGATCACG CCATGCCGAC 
GTCGAATCCT TCGACACCCA GGCTGCCTAC CAGGAGGCGC TGCGCCGGCG CGTGGGCATC 
GGTACCTCGT CGGCCGCGCT CGCCCTGCTG GGCAAGGCCA AGGCGATGAA GAACGTCGGC 
GATCTCGACG CCTTCATCCG CACCTACATG CTGGACCGGC CGCAGACCTA CGCCCGCGCC 
GAGCGGCTGG TGGAGAACTT CACCCAGCTC GACGAGGCCT ACCGTGCCGC CGCCCGCGCC 
GAGGCGCAGG AGAAGGTGCT GCGCCCCATG CCCGAGGCGT ACGAGAAGTA CCGCACCGCC 
ACCGTCGGGA CGACGCGCGC GGCCGATCTC CTGGGCGCCC CGGTGCGCTC GTATCTGCGT 
GGTCATCGGC TCCGGTTGCT CCAGGAGGAG ATGGACCGGA TCGAAGGCGA GCGCGCGGGT 
ATGGACGCGC AGATCGCCCG CTGGGAGGAC AAGGCCGAAG AGCGCAAACA GCGCTACAAC 
GATCTGCTGC ACCGGCTGCG CCAGGAGCAG GGCGAAGTGG GTGTCCTGGA GGCCGAACTC 
CAGTCCCGGG AATTGCAGAC CCAGGCCCGC CAGCGCGCCT ATGAGCGGTT CGCCACCGCA 
GTCGAGAAGC TCGGAGAGCG GGCGCCGGAG TCCGCGGAGG AATTCGCGGC CCTGCGCGAA 
CAGGTCCCGG GCATCCGTGA TCGCGCCACC GAGGCCGCCG AGGCGCTCGC CGGTCGCGTC 
CACAGCGCCT ACACCGACGA ATCCGACGCC CGGCGCGCCG TCGAATCCGT CGACGACGAG 
CTGGCCGTGC TGGATCGGCG CGCATCGCTG CTGCCACCCG CGCTACTCGA CCAGCGCGAC 
GTGATCGCCC GCTCCACCGG TGTCCCCGCC GAGGAGCTCC CGTACGCGGC GGAGTTGATC 
GATGTGAAGC CCGCGGAGCA GGCGACGTGG GCCGCCGCCG CCGAGCGCGT GCTGCGCCCG 
CTCGCCACCA CGCTGCTGGT GCCCGCGCGC CACCAGCGCG CGGTGGCCGA TCACGTGAAC 
GCCCATCGTG TGCAGGGCGT CCTCACCTAC CAGGTCGTCG AGGGGCCCGA CCGCACTGCC 
GCGGTCGAGG GTTCGCTGGC CACCAAGCTC ATCGTCGACG AGCGCACCGA CGCCGGACAG 
TGGCTCGCGG GCGCGGTGGC GCGGGCGGCC CGCCACATCT GCGTCGACTC CCCCGCTGAG 
CTCGAGGACC ACGACCAGGC GGTTACGCCG GAGGGCCTGG TCAAGGGAGC GGGCGGGCGG 
TTCCGCAAGG ACGACCGCCG CGCCGTCGCC GACCGGTCGC AGTGGGTGCT GGGAACAAAT 
ACCGGGTCCA AGCGCGAGGC GCTGCAGCGC CGCCGCGACG AATTGGCGTC GGTGCACGTC 
AAAGCCGCCG AGGCGTCGGC GACGCTGCGT GATGACCTCG CCGAGTACAA GGCCGTGGCC 
GACGGGGCCA CGGGGGTGCT CGGCTACGCG TCCTGGTCGG AGCTCGATCA CTGGGCGGCG 
AAAGCCGAGG CCGAGGACCT CGCCGACCGG ATCTCCGACG CCCGGTCGGG CAATGCCGAC 
CTGAGCGAGC TGGAGCTGCA GGCCGACAAC GCCTACGGCG AACTCGCCGA GGCGCAGACC 
CGGATCGGCG CGCTCACCGA GACGATGAAC CGTGCCGGGA GCGAATTCGA TGATCTGCTG 
GCCGAATTCG AGAAGCTCGA CGGTGAGAGC GCCCCGAAAC TGACGGACGA GGACCGGGAG 
TTCCTGGACA CCGCGCTGTG GCATCTGCTC ACGGCCGACG AAACCCGGCG GCGCCGCCTG 
ACACTGGACA CCTACGGCGA GATCCGCGCG GATCTGCGAG CCGAGTTGGA ACGCCAACAG 
GCCGCCGCGA CCGCCGAGCG CGATGCGGCG GAGACCCGCA TCGTGCGCAC CGCCGAACAA 
TTCCTGCGCG AGTGGCCGGA TGCCTCCACC GAGCTCCGGG CCGCTGTGGC GTCGGCACCG 
GACTTCGTCG CGGTGCACGA GAACCTGATC GCACACGGGC TGGCCGCCGC GACGGAGAAG 
TTCCGGCGGC TCATCACCAC CGACGTCAGC CACTCGGTCT CGAACCTTTT CAAAGAAGTC 
GATGACACGC ACCGGGCGAT CACCCGCGGT ATCGCGGACG TCAACGCCGG CCTGCGCCGG 
GTGGAGTTCA ATGAGGGCAC CTACCTGCAG ATCGCGTACG CCGCACGGCC GACGCCGGAG 
GCCACGGAGT TCGCGACTCT GGTCGACGAG ATGGTGCGCG ACGCGCCGGC CGCGAAACGG 
GCCGAACCCG AGGCGATGGC CGCACAGTTC AAGCGGATCC GCGGCCTGGT GTTGCGCCTG 
ACCGGCGACG ACCCCGAGTC GCGCAGGTGG ACCGAGAACG TATTGGATGT GCGCACCGGC 
TATTCGTTCT ACGGCCGGGA GAATGCGGTC GGCGCCGAAC CCGACGCGCC GGCGGTGGTG 
ACCTACCGCA ATACCGCCAC CAATTCCGGT GGTGAACAGG AGAAATTGGT GGCCTTCTGC 
CTGGCCGCGG CGTTGAGCTT CGCACTCGGC AGCCATGGCA TCGACGGATC GAACGAGCCG 
GCGTTCGCGC CGCTCATGCT CGACGAGGCC TTCAGCAAAT CCGATGAACG GTTCTCGGCG 
CAGTCCCTGC GCGCGTTCGA GCAGTTCGGT TTCCAGTTGA TCATCGCCGC CCCGATCCGC 
ATGGTGGGCA TCGTCGAACC CTTCATCGGG CAGGTCATCC TGGTCGACAA GCACACCGGG 
GCGGACGGTG CGCGCTCCGA CGCCCGGTAC GCCACCTTCG GTGAGCTGAC GACGGCGCGC 
TAG 

 

Protein sequence

MTRRHLGQYR LTRLQVVNWG TFDGYKDFPI DERGVILTGP SGSGKSSLMD AHSVVLLPTY 
DQSFNASADM TAKGAKRAAR SMADYVRGAW SVNDDEHQQS KVQYLRGDSA TWSAVAATYD 
NGAGTVTTAV AVKWFAGSGT DGSSLKSWYH LHSGPFDLLD LQDWATAGFD TRGWRSRHAD 
VESFDTQAAY QEALRRRVGI GTSSAALALL GKAKAMKNVG DLDAFIRTYM LDRPQTYARA 
ERLVENFTQL DEAYRAAARA EAQEKVLRPM PEAYEKYRTA TVGTTRAADL LGAPVRSYLR 
GHRLRLLQEE MDRIEGERAG MDAQIARWED KAEERKQRYN DLLHRLRQEQ GEVGVLEAEL 
QSRELQTQAR QRAYERFATA VEKLGERAPE SAEEFAALRE QVPGIRDRAT EAAEALAGRV 
HSAYTDESDA RRAVESVDDE LAVLDRRASL LPPALLDQRD VIARSTGVPA EELPYAAELI 
DVKPAEQATW AAAAERVLRP LATTLLVPAR HQRAVADHVN AHRVQGVLTY QVVEGPDRTA 
AVEGSLATKL IVDERTDAGQ WLAGAVARAA RHICVDSPAE LEDHDQAVTP EGLVKGAGGR 
FRKDDRRAVA DRSQWVLGTN TGSKREALQR RRDELASVHV KAAEASATLR DDLAEYKAVA 
DGATGVLGYA SWSELDHWAA KAEAEDLADR ISDARSGNAD LSELELQADN AYGELAEAQT 
RIGALTETMN RAGSEFDDLL AEFEKLDGES APKLTDEDRE FLDTALWHLL TADETRRRRL 
TLDTYGEIRA DLRAELERQQ AAATAERDAA ETRIVRTAEQ FLREWPDAST ELRAAVASAP 
DFVAVHENLI AHGLAAATEK FRRLITTDVS HSVSNLFKEV DDTHRAITRG IADVNAGLRR 
VEFNEGTYLQ IAYAARPTPE ATEFATLVDE MVRDAPAAKR AEPEAMAAQF KRIRGLVLRL 
TGDDPESRRW TENVLDVRTG YSFYGRENAV GAEPDAPAVV TYRNTATNSG GEQEKLVAFC 
LAAALSFALG SHGIDGSNEP AFAPLMLDEA FSKSDERFSA QSLRAFEQFG FQLIIAAPIR 
MVGIVEPFIG QVILVDKHTG ADGARSDARY ATFGELTTAR