Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_2009 |
Symbol | |
ID | 9156164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 2096530 |
End bp | 2097234 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | NUDIX hydrolase |
Protein accession | YP_003646960 |
Protein GI | 296139717 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.509117 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGATG GTAGCACCGG ATCGGCGGAA CCCGCGATCG CTCACGAAGT GCTGAGTGTC GTCTTCCGCG TCGCCGCAGG ACAGGTGCAC GTGCTGTTGT GGCAACGCGC CATGGATCCG TACTCCGGAG CATGGGCGCT GCCGGGCGGT GCGCTGCGAT TCGACGAGGA CCTGCCCACG TCGGCCCGGC GTCAGCTCGC CGAGAAGGTG GACGTGACCG ATGTGGCCCA CCTCGAACAA TTCGGAGAGT TCTCCGATCC CCACCGGGTT CCGGCGACCC CTTCCTCCGC ACGCACGATC GCATCGGTCT TCCTCGGGCT GGTGCGCACC GACACCAACC CACGACTGCC CGACGACACC GATTGGCACG ACCTGGACAG CCTGCCCGAA ATGGCCTTCG ATCACGCCGT GATGGTGCAC CGGGCGAGAG CCCGGGTCGC GGCACGCCTG TCCTACTCCA ATATCGGATT CGCCCTCGCT CCGCGCGAAT TCCCCGTCTC GGAGCTGCGC GACATCTACG TCGCGGTGCT GGGATACCCG GTGGACGCGA CGAACCTACT GCGGATTCTG TCGCGCCGTT CGGTGATCAC CGCCACCGGA GGCACGGCAC GCTCAGGACG CGGACGTCCT CCGGCGTTGT ACCGGTTCAC CGACTCCTAC CTGCGGATCA CCGACGAGTT CGCCACGCTG CGGCCGCCGG GCTGA
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Protein sequence | MPDGSTGSAE PAIAHEVLSV VFRVAAGQVH VLLWQRAMDP YSGAWALPGG ALRFDEDLPT SARRQLAEKV DVTDVAHLEQ FGEFSDPHRV PATPSSARTI ASVFLGLVRT DTNPRLPDDT DWHDLDSLPE MAFDHAVMVH RARARVAARL SYSNIGFALA PREFPVSELR DIYVAVLGYP VDATNLLRIL SRRSVITATG GTARSGRGRP PALYRFTDSY LRITDEFATL RPPG
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