Gene Tpau_1990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1990 
Symbol 
ID9156145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp2079260 
End bp2080354 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content72% 
IMG OID 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_003646941 
Protein GI296139698 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTCGACG GTGACCGCAT GCGCTTCGGC TTCGCCGCGT CGGTCATCGG CCTCATCACG 
GCCGTGCCCA CGCTGCGGTG GGGCGAGAAT TCGCCGTGGA CCTACGTCCT GTTCGCGATC
ACCAGCGCCG TCATCGTGCA GCGCACCCTT CCCGCCGATC GTCTTCCACT CCAGGCCGCG
GTCGCCGTCG AAGCGATCGG CGCCGTCGCG AGCGGCGCGC TGTTCGCCCT GCAGCCGAAC
CCGGGAATCG GGATGCTCCT GTACGTCTCG GCGGTGTACT TCGGGGCACG TTTCCCACAG
CGGATCGCGA TTGCGCTGGC GGTACTGCTC GGCGGCACCG TCGCGGCCGG ACTGGGCCTG
CAACGCTCCA CGGATTTCTG GATCGGTCTG AGCGTCACCG TCGCGGTGTG GGCGGGCATC
GTGCGGCGCA CACGACGCGA ACGGACCCAG GCACTGGAAC AGCTCGTCGA GCAGACGCAG
CGCACCGCCG CGTCGGAGGC CCGCAGCAGC GCGCTCGCCG AACGTGCGCG GATCGCCCGC
GACCTGCACG ATGTGCTGGC GCACACGCTC TCCGGCGCGG GAATGCAGCT CGAACTCGCG
GACGCCCTAT TGGAGGCAGG CCGGCCGGAG GACGCGCGGA CCGCGGTGCA GCGGGCCCGG
GGCGCCATCG CCGGCGGGGT CACCGAGGCC CGCGACGCCG TGCACGCCCT CCGCGAGGAC
ATCATCGATC TCCCCGCGGC GCTCGCCGCC CTCGCCGACG GGGAGAACGA GACGGTCAGT
GCCGATCCGG TCGACATCGA CGACGCGGCC GGGCGCGCCG TCCTGCGCGT CGCGCAAGAG
GCCTTCACCA ATGCCCGCCG CCATGCGCCG GGTGCCGCCG TCACCGCTTC GCTGTCCGCG
CAGCCGGACG GTGTGCGTCT GACCGTCGCC AACGGTCCCG GCCGGACCGC CGAAGCCACC
CACGGATCGG GCATGGGATT GATCGGTATG CGCGAGCGCG CCGCGGAAGT CGACGGCGTG
CTGCACGCCG GACCCGCGGC CGACGGCGGA TGGACGGTGA CGCTCACCGT CCCAGAAAGG
AGCCCGGTGC AATGA
 
Protein sequence
MFDGDRMRFG FAASVIGLIT AVPTLRWGEN SPWTYVLFAI TSAVIVQRTL PADRLPLQAA 
VAVEAIGAVA SGALFALQPN PGIGMLLYVS AVYFGARFPQ RIAIALAVLL GGTVAAGLGL
QRSTDFWIGL SVTVAVWAGI VRRTRRERTQ ALEQLVEQTQ RTAASEARSS ALAERARIAR
DLHDVLAHTL SGAGMQLELA DALLEAGRPE DARTAVQRAR GAIAGGVTEA RDAVHALRED
IIDLPAALAA LADGENETVS ADPVDIDDAA GRAVLRVAQE AFTNARRHAP GAAVTASLSA
QPDGVRLTVA NGPGRTAEAT HGSGMGLIGM RERAAEVDGV LHAGPAADGG WTVTLTVPER
SPVQ