| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1975 |
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| Symbol | |
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| ID | 9156130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 2063546 |
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| End bp | 2066218 |
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| Gene Length | 2673 bp |
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| Protein Length | 890 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_003646926 |
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| Protein GI | 296139683 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.235306 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAGACCC ATGAGATTCG GAAGCGGTTC ACGGACCACT TCGTCAAGGC CGGTCACACC
CAGGTGCCGA GTGCATCGCT GGTGCTGAAC GACCCGAATC AGCTGTTCGT GATCGCGGGC
ATGGTGCCCT TCGTTCCGTA CTTCCTGGGC CAGCAGACGC CGCCGTACGA GCGCGCCACG
TCGATCCAGA AGTGTGTGCG CACCCTCGAT ATCGAGGAGG TGGGCATCAC CACCCGGCAC
AACACCTTCT TCCAGATGGC GGGCAATTTC AGCTTCGGCG ACTACTTCAA GCGCGACGCG
ATCCGGTTCG CCTGGAGCCT GCTTACGAAC CCGGTCGAGG ACGGCGGATT CGGCATGGAC
CCGCAGCGGC TGTGGTCCAC GGTCTATCTC GACGACGATG AGGCCCGCGA CCTGTGGCTC
GAGGTAGGGC AGGTACCCGA GCGCATCCAG CGCCGCGGCA TGAAGGACAA CTACTGGTCG
ATGGGCATCC CCGGCCCGGC CGGCCCCTGC TCGGAGATCT TCTACGACCG CGGTCCGGAG
TACGGCGTGG AGGGTGGTCC CGAGGCCGAC GAGGACCGCT ACATCGAGAT CTGGAACCTC
GTTTTCATGC AGAACGAGCG CGGCCAGGGC GGCGGCAAGG AGAACTTCGA GATCCTCGGC
GAGCTGCCGA AGAAGAACAT CGACACCGGC ATGGGTATCG AGCGCGTCGC CTTCCTCTTA
CAAGGTGTCG ACAACGTCTA CGACACCGAT CTGCTGCGTC CGGTGATCGA CCGCGCGCAG
GACCTCACCG GCCAGCGCTA CAACGCCGGA GATCCCGAAC ACGATCGGCT CTTTCGCGTC
ATCGCCGACC ACACCCGCAC CGCGGTGATG CTGATCGAGG ACGGCGTGAA CCCCGGCAAC
GACGGTCGCG GCTACGTGCT GCGCCGCCTG TTGCGTCGGG TGGTCCGGTC GGCTCGCCTG
CTCGGCGCGA CGGGCGAGAC CATGGGTGTT TTCGTCGATA CCGTGATCGC CACGATGTCG
CCGTCGTATC CGTCGTTGGC CGACGATGCG CAGCGGATCC GCACTGTCGC CACCGGCGAG
GAGGCGGCCT TCCTCAAGAC TCTGGAGCAG GGCATCACCC TGTTCGGTAA TGCCGTCGAC
TCCACCAAAT CCGCCGGTAA GACCGTGCTG TCCGGTGACG ACGCTTTCAC CCTGCACGAC
ACCTACGGCT TCCCGATCGA TCTCACCCTG GAGATGGCCT CCGAGGCCGG CCTTCAGGTC
GACGAGGACG GCTTCCGCGC ACTGATGGCC GAGCAGCGCC AGCGTGCCAA GGACGATGCG
AACTCCCGCA AATCGGCGCT CGCGGATCTC TCGGTGTTCC GGGAGTTCCT CGACCGCGGT
CCCACTGAGT TCACCGGTTT CGATGAACTG GTCTCCGATG CCCGGGTGCT CGGTCTGGTC
AAGGACGGCG TGCGCGTGCC CGTCGTGCAC CAGGGCGACG ACGTGGAGAT CGTGCTCGAC
CGCAGCCCCC TCTACGCCGA GGCCGGCGGC CAACTCGCCG ACATCGGCAC CATCACCACC
GCCGCCGGCG CGCAGATCGT CGTGACCGAC GTACAGCGCG TCGCCAAGAC GCTGTGGCGC
CACCAGGGCA CCGTCGCCGT GGGCGAGGTC TCCGAGGGCG ATGCGGTCAC CGTCGCCGTC
GATGCGGGCC ACCGGCACGG CAGTACTCAG GGCCACTCCG GCACCCACCT CGTCCACGCC
GCACTCCGAC AGGTGCTGGG CCCCAACGCC GTTCAGGCAG GCTCGCTCAA CCGGCCCGGG
TACTTGCGAT TCGACTTCCG TTGGTCCGGC GGGCTCAGCG AGGACCAGCG CACCGATATC
GAGCGCGTCA CGAACGAGGC CGTGCAGGCC GACTACGACG TGCACACCCA GGTCACTGAT
CTGGAAACCG CCAAGAAGAG CGGGGCGATG GCGCTGTTCG GCGAGAACTA CGGCGACCAG
GTGCGTGTCG TCGAGATCGG TGGCCCGTTC TCGATGGAGC TGTGCGGCGG CACCCACGTC
GCCAGTTCGG GCCTCGTCGG GCCCGTCACC CTGCTCGGCG AGAGCTCGGT CGGATCCGGT
GTGCGCCGCG TCGAGGCCTA TGTCGGGCTC GACTCGCAGA AGTACCTGGC CAAGGAGCGC
GCTCTCGTGT CCGCGCTGAC GAGTTCACTC AAGGTGCCCG CCGAGGACGT GCCCGGCCGG
GTCGAGTCGC TGGTCAGCCG CCTCAAGGAT GCCGAGAAGG AACTCGAGAA GCTGCGTGCT
CAGGCCGCGC TGTCAGCGCT GTCCGAGCTG GCCTCCTCGC CCGATCGGGT GGGCGCGGTG
CGGCTCGTCG CCGCACAGGC CCCCTCCGGG GTCGCGGCGG GCGAGCTACG GAGTCTGGTG
ACGCAGCTCA AGGGGCGGCT CGGCGCCGAA GCCGCGGTGA TCGCGCTGTT CGCCGTGGAC
GGTGAGAAGG TGCCCTTCGT GGTGGCCGCG AACGATGCCG CCCAGGATCT CGGCGTCAAG
GCCGGTGACG TGGTGAAGGC CGCGGCGCCC GCGGTCGGTG GCCGTGGCGG CGGCAAGGCC
GATATGGCGC AGGGCGCCGG CTCCGACGCG TCCGGTATGG GGGCCGCGCT CGCCGCGGTC
CGGGCCGAGG TCGCGCGGGT GGCGGGCGCC TGA
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| Protein sequence | MQTHEIRKRF TDHFVKAGHT QVPSASLVLN DPNQLFVIAG MVPFVPYFLG QQTPPYERAT
SIQKCVRTLD IEEVGITTRH NTFFQMAGNF SFGDYFKRDA IRFAWSLLTN PVEDGGFGMD
PQRLWSTVYL DDDEARDLWL EVGQVPERIQ RRGMKDNYWS MGIPGPAGPC SEIFYDRGPE
YGVEGGPEAD EDRYIEIWNL VFMQNERGQG GGKENFEILG ELPKKNIDTG MGIERVAFLL
QGVDNVYDTD LLRPVIDRAQ DLTGQRYNAG DPEHDRLFRV IADHTRTAVM LIEDGVNPGN
DGRGYVLRRL LRRVVRSARL LGATGETMGV FVDTVIATMS PSYPSLADDA QRIRTVATGE
EAAFLKTLEQ GITLFGNAVD STKSAGKTVL SGDDAFTLHD TYGFPIDLTL EMASEAGLQV
DEDGFRALMA EQRQRAKDDA NSRKSALADL SVFREFLDRG PTEFTGFDEL VSDARVLGLV
KDGVRVPVVH QGDDVEIVLD RSPLYAEAGG QLADIGTITT AAGAQIVVTD VQRVAKTLWR
HQGTVAVGEV SEGDAVTVAV DAGHRHGSTQ GHSGTHLVHA ALRQVLGPNA VQAGSLNRPG
YLRFDFRWSG GLSEDQRTDI ERVTNEAVQA DYDVHTQVTD LETAKKSGAM ALFGENYGDQ
VRVVEIGGPF SMELCGGTHV ASSGLVGPVT LLGESSVGSG VRRVEAYVGL DSQKYLAKER
ALVSALTSSL KVPAEDVPGR VESLVSRLKD AEKELEKLRA QAALSALSEL ASSPDRVGAV
RLVAAQAPSG VAAGELRSLV TQLKGRLGAE AAVIALFAVD GEKVPFVVAA NDAAQDLGVK
AGDVVKAAAP AVGGRGGGKA DMAQGAGSDA SGMGAALAAV RAEVARVAGA
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