Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_1943 |
Symbol | |
ID | 9156098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 2028813 |
End bp | 2029937 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | protein-export membrane protein SecF |
Protein accession | YP_003646895 |
Protein GI | 296139652 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00503357 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGACA CCACGACTCA GGTCTCCGAG CAGGAGAAGA AGGCCGGATT CTTCACCAAG CTCTACACGG GCACCGGTGC CTTCGACATC ATCGGACGCC GCAACCGCTA CTACATCGCC ACCGGCATCA TCATCGTGAT CGCGATCCTC GGCATCCTGA TCCCGGGCTT CAAGCTGAGC ATCGACTTCG AGGGCGGTAC CCAGGTGTCG TTCCCGGTCG GCAGTGCGCA AGCCGATACC GCGAAGGCTC GCGAGGTGGT GCAGTCCGCG ACCGGTATCG CACCGTCTGC CGTGCAGACC GCCGGATCCG GTGCCTCCCA GACGTACCAG ATCTCGACCT CCGAGCTCAG TGCGGACCAG ATCACCAAGG CCCGCGCCGC GCTCTTCGAG CAGTTCCAGC CCCCGGGCCG CGACGGCAAG CCCTCCGCGA ACACCATCAG CTTCTCAGCG GTGAGTTCGA CGTGGGGCGG ACAGATCACC CAGCGCGCGC TGCTCGGTCT CATCGTGTTC CTGGTGCTGG TGACGATCTA CATCGCGGTC CGCTTCCGGG AGTTGGAGAT GGCGCTCGCC GCACTGGCAT CGCTGTTCTT CGACGTGATC GTCACCGCCG GCGTCTATGC CTGGTCGGGG TTCGAGGTCA GTCCCGCAAC GGTGATCGGC CTGCTCACCA TCCTGGGCTT CTCGCTCTAC GACACGGTGG TCGTCTTCGA CAAGGTCGAG GAGAACGTGC GCGGCGTACT GCACACCAAC CGGAGGACCT ACGCCGAACA GGCCAACCTC GCTGTGAATC AGACTCTGAT GCGGTCGATC AACACCACGG TCATCTCGGC GCTGCCGATC GTGGCGCTGA TGGTGGTCGC CGCATGGATC CTGGGCGTGG GCACCCTGAT GGACCTCGGC CTGGTCCAGT TGGTCGGTGT GGTCGTCGGT ACGTACTCGT CGGTGTTCTT CGCGTCGCCG CTGTTGGTGA CACTCAAGGA GCGCAAGCCC GAGTACAAGG CGCACACCCA GAAGGTGCTC AACAAGCGCC GGGCCGTGGG CGTCGAGGCG GAGTCCGCTG TGGTGCAGAC CGCACAGCGG CTCTCCCGTC CGCCGGTGCG CAAGCGCGAC CGCCGTCGTG GCTGA
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Protein sequence | MSDTTTQVSE QEKKAGFFTK LYTGTGAFDI IGRRNRYYIA TGIIIVIAIL GILIPGFKLS IDFEGGTQVS FPVGSAQADT AKAREVVQSA TGIAPSAVQT AGSGASQTYQ ISTSELSADQ ITKARAALFE QFQPPGRDGK PSANTISFSA VSSTWGGQIT QRALLGLIVF LVLVTIYIAV RFRELEMALA ALASLFFDVI VTAGVYAWSG FEVSPATVIG LLTILGFSLY DTVVVFDKVE ENVRGVLHTN RRTYAEQANL AVNQTLMRSI NTTVISALPI VALMVVAAWI LGVGTLMDLG LVQLVGVVVG TYSSVFFASP LLVTLKERKP EYKAHTQKVL NKRRAVGVEA ESAVVQTAQR LSRPPVRKRD RRRG
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