Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_1868 |
Symbol | |
ID | 9156018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 1952883 |
End bp | 1954331 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | plasmid pRiA4b ORF-3 family protein |
Protein accession | YP_003646820 |
Protein GI | 296139577 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCCCGCG AGTATGTGGA GGGGCTGAGC CCGCAGGAGA GACGGGTTGT GCTTGATGCG GTGGTGAACG CGCGGTTCGC TGCAGAGGTC GATGCTCTGA CGCGGGTGCG GCAGCCGACG CTGCTACCTG TGCCTGACCG GGTGGTCGGG TTTCGTGTCC GGTTGGATCT GCATGGCGCG AAGCCTCCTG TGTGGCGGCG GCTGGAGTTG CCCGGCGATC TGACACTTTC TGCTGTGCAC GAGGTGATCC AGGCGGCGAT GGGCTGGTAC GACTGTCACC TGCACAAGTT CAGGACAGGC AGCGATCATC GTTCTCCGGC CTTCCTGACG GCATTCGATG TCAGCGAGGG CGAGGAAGGG GTGCTGGAGC AGGATGTCCG GCTCGATCAG GTCATCGCGG GCGTGGGTGA CGAGCTGTGG TACGAGTACG ACTTTGGCGA TGGCTGGGAG CACAAGCTCA AGGTTGAGCA GGTCCTCGAC ACCTGTCCGT CTGCGTCGCT GTGTGTGGCG GGGAAGAACG CGTGCCCGCC TGAGGACTGC GGTGGTCTGG GCGGGTTCCA TGAAGTAGCA CTGTGGGTTC GCAAGGGTAG GGACGCGGCG CACCTTCCTG ACAGTTTCGG CAGCGCGGAG GAGGCGAACG ACTGGCTCCC TGGGGGCTGG GACCCGGATG TCTTCGACGT CGATGACGCC AATGCCGCCA TCACGCTCGC TCTTTTCGAT CCTGCTTCGG TTCTGGCTCC AGGCCACGGT GAACTGGGGC AGATCGCCCA TCGGCTGACG ATGCAGGGCA GCTCGTTGTT GCAGGGGGTG CTCGCGCGGC CGCAGTCGCA CGGCCAGGCC AGTGTGTCCG CCGCGGAAGC TGAACGGCTC ACCGAGCCTT ACCGTCTGCT GCTCGAAGAA GTCGGTGAGG GGGTCAAGCT CACCGCCGCG GGTTACCTCC CGCCTGTTGT GGTCGAGCGG TTCGCGCAGC GCAGTGGCAT CGCGAACTGG TGGATGGGAA AGGCGAACCG GGAGGATCTC ACGCCTCCGG TGGCGACGGT GCGTGAAGCG GCGCAGGCGG TGGGGCTACT CAGTGTCCGC AAGGGCAGGA TCAGCCCAAC CCGGGCTGCT CGTCGCATCG GCGGTGACCC CACAGCGTTG TGGGAACACA TCGTGGGACG GCTTCCTTGC GGTACCAAGG ATTTCGATCG TGAGGCCGGA TGGCTCCTGC TTGCCGTGGT CGGGAGCGGA ACACCGGTGG AGAACTGGCG AAAAGAGGTC AGTGACCTGC TCTACGCAGC AGGATGGAGA ACCGGCGGCG CCAACCGCTA CCCGATGATG CTGCCCGTGA CGAGCCCGAC CTACACGATC CTCGAGAGCA TGACCGATAC GCACCGCGAT AGATGGCACG TGCGCGGAAC AGACGACGGT ATCGCTGCTA CCGCCCGCGC AGTGCTCAAC CAGCGATAA
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Protein sequence | MAREYVEGLS PQERRVVLDA VVNARFAAEV DALTRVRQPT LLPVPDRVVG FRVRLDLHGA KPPVWRRLEL PGDLTLSAVH EVIQAAMGWY DCHLHKFRTG SDHRSPAFLT AFDVSEGEEG VLEQDVRLDQ VIAGVGDELW YEYDFGDGWE HKLKVEQVLD TCPSASLCVA GKNACPPEDC GGLGGFHEVA LWVRKGRDAA HLPDSFGSAE EANDWLPGGW DPDVFDVDDA NAAITLALFD PASVLAPGHG ELGQIAHRLT MQGSSLLQGV LARPQSHGQA SVSAAEAERL TEPYRLLLEE VGEGVKLTAA GYLPPVVVER FAQRSGIANW WMGKANREDL TPPVATVREA AQAVGLLSVR KGRISPTRAA RRIGGDPTAL WEHIVGRLPC GTKDFDREAG WLLLAVVGSG TPVENWRKEV SDLLYAAGWR TGGANRYPMM LPVTSPTYTI LESMTDTHRD RWHVRGTDDG IAATARAVLN QR
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