Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_1860 |
Symbol | |
ID | 9156010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 1942964 |
End bp | 1944187 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | acyl-CoA dehydrogenase domain protein |
Protein accession | YP_003646813 |
Protein GI | 296139570 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.51043 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATTCG GATACGACGC CACGACCACG GAGCTGATCG CCGAGGTCAA CGAGTTCATG GAGAGCCACG TGTACCCGGC GGAAGAGACG TTCCACCGGC AGCTGGGGGA ACTCGACAAC CGCTGGGCCT GGGACAGCGT TCCCGTGCTG CAGGAACTGC GCGCCGAGGC CCGTCGGCGT GGATTCTGGA ACTTCTTCCT ACCCGGTGAG GGCGGCGCCG GACTGACCAA CCTCCAGTAC GCTCCGCTGG CCGAGATCTC GGGCCGCGCA TTGCATCTGG CCCCCGCGGT ATTCAACTGC GCCGCGCCCG ACACCGGCAA CATGGAGGTG CTCAACGAGT TCGGTACCCC GGAGCAGAAG GAGCGCTGGC TCACGCCTCT GCTCGACGGG TCGATCCGGT CTGCGTTCGC GATGACCGAG CCCGACGTCG CCAGCTCCGA TGCCACCAAC ATCGGGCTGT CCATCGTCCG CGACGGCGAC GACTACGTGA TCAACGGCCG CAAATGGTGG ATCACCGGTG CCATGAATCC CAACTGCAAG ATCTTCATCG TCATGGGCAA GACAGCGCCC GATGCCGAAC GACACCGCCA GCAGTCCCAG ATCCTGGTGC CGCGTGAGAC TCCCGGGGTC GAGGTACTGC GCGGTATGGA GGTGTTCGGC TACGACGATC ACAACCACGG TGGCCACGCC GAGATGCGGT TCACCGATGT TCGCGTGCCG GCCAGCAACC TGATCGGTGA GGAGGGCGGC GGTTTCGCCG TCGCCCAGGC CCGTCTCGGG CCCGGACGAA TCCATCACTG CATGCGGTCG ATCGGTGTCG CCGAGCGCGC TGTCGAGTTG ATGTGCGACC GGGTATCCGG CCGCACGGCC TTCGGGAAGC CGCTCTCCGA ACAAGGGGTG ATCCGCGACT GGATCGCCGA GTCGCGCGTG AAGATCGAGC AATTGCGCCT GTTGGTGCTC AAGACCGCCT GGTTGATGGA CACAGTAGGT AATCGCGGCG CGCACACCGA AATCCAGGCG ATCAAGATTG CGACTCCGCA GACGGTGCAG TGGATCTTGG ACAAGGCCAT TCAGGCCCAC GGCGCCGGTG GGCTCTCGCA GGACTTCACC CTGGCCGAGT ACTACGCGGG CATTCGTACT CTCCGGTTCG CCGACGGTCC CGACGAGGTA CACAAGAATT CCCTCGCGCG CGCCGAGCTG AAGAAGCGGG CGGCGGCGAA GTGA
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Protein sequence | MEFGYDATTT ELIAEVNEFM ESHVYPAEET FHRQLGELDN RWAWDSVPVL QELRAEARRR GFWNFFLPGE GGAGLTNLQY APLAEISGRA LHLAPAVFNC AAPDTGNMEV LNEFGTPEQK ERWLTPLLDG SIRSAFAMTE PDVASSDATN IGLSIVRDGD DYVINGRKWW ITGAMNPNCK IFIVMGKTAP DAERHRQQSQ ILVPRETPGV EVLRGMEVFG YDDHNHGGHA EMRFTDVRVP ASNLIGEEGG GFAVAQARLG PGRIHHCMRS IGVAERAVEL MCDRVSGRTA FGKPLSEQGV IRDWIAESRV KIEQLRLLVL KTAWLMDTVG NRGAHTEIQA IKIATPQTVQ WILDKAIQAH GAGGLSQDFT LAEYYAGIRT LRFADGPDEV HKNSLARAEL KKRAAAK
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