| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1639 |
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| Symbol | |
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| ID | 9155789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 1712084 |
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| End bp | 1713475 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003646599 |
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| Protein GI | 296139356 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.102178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAGGA CGATGAACAA GACGTTTTCT CGATTCGTGA CAGCGGTCGC CGCGGTATCC
GTGGTGACCT CCACTGCAGG GTGCGGTTCC GGTGGCACGG CGCCCTCGAA CGTGATCAAT
TACTGGCTGT GGGATAACAA TCAACAACCC GTCTATCAAA AGTGCGCTGA CGCTTTCGAA
GCGGCGCACC CGGGCCGGAA AGTCGCGATC ACCCAGTACG GCTGGAGCAG CTACTTCACG
AAGCTCGCAT CGGGCTTCAT CGCCGACACC GGACCGGACG TCTTCACCGA TCACGTGTCC
AAGCTCGGAC AGCACCTCGA CCTCGAGGTG CTCCAGCCCC TGGACGAACT CGCCGCCACC
AAGGGGATCA AGGACGAGGA CTACCTTCCT CAGCTCGCCG CGCTGTGGAA GGGGCCCGAC
GGTCGGCGGT ACGGCGTGCC CAAGGACTGG GACACCGTCG CGTACTTCTA CAACAAGGAC
GCCACCGCCG CCGCAGGCGT GACCGACGCC GAGCTCCAGA GCATGACCTG GAACCCCGAC
GACGGAGGCA CACTCGAGAA GGTCCTCGCC CGGCTCACCG TCGATGAGAA GGGTGTACGG
GGTGACCAGC CCGGCTTCGA CAAGACGCGA GTGAAATCGT ACGGTCTCGC GGGGACGGAT
TCGGGCTACG GCGGATTCGG GCAATCGCAG TGGTCGCCGT ACACCGGTTC GATCGGGTGG
AACTTCACCG ACAAGAATCC CTGGGGCGCG AGGTTCAACT TCGATGACCC CAAGGTCCAG
AAGACGATCG ACTGGTACTT CGGGTTGGCG AAGAAGGGGT TCATGGCCCC CTTCGCGGTG
GCCGGTAACA ACACGTCCGG GATCGGTGCC GACAAGCAGA TGAGCGCGGG CAACGCCGCC
ATGGCGCTCG CCGGATCCTT CATGATCTCG TCCTACTTCA AGCTCGTCGA TCCGCAGGGC
AAGCCCCTCC CGATCGGTTT GGCGCCCACG CCCGTCGGGC CGTCCGGGAA ACGGGCGTCG
ATGTTCAACG GACTCGCGGA CGTCGTCTCG AAGCAGTCGA AGAATCCGGA GCTTGCGGGG
GAGTGGGTGG CGTTCTTGGG AAGTGACGCG TGCCAGGACA TCGTCGGGGA CTCCGGTGCG
GTTTTCCCCG CCCGGCCCAA CGGTATGACC ATCGCGAAGC AGCGCCAGGC GGCGGCCGGT
GTGGACATCA CCCCGTTCAC GATGCATGTG GACGACGGCA CGACATTCAC GATTCCGGTG
ACCACCGATG CCGCCGACAT CGTCCCGCTC ATGCAGTCTG CGTTCGACCC GATCTATCTG
GGATCGGCGT CGGGATCGTC GCTGTCCACG CTGAATCGGC AGATGAACAG GCTGCTCGAG
AGCAACAGCT GA
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| Protein sequence | MSRTMNKTFS RFVTAVAAVS VVTSTAGCGS GGTAPSNVIN YWLWDNNQQP VYQKCADAFE
AAHPGRKVAI TQYGWSSYFT KLASGFIADT GPDVFTDHVS KLGQHLDLEV LQPLDELAAT
KGIKDEDYLP QLAALWKGPD GRRYGVPKDW DTVAYFYNKD ATAAAGVTDA ELQSMTWNPD
DGGTLEKVLA RLTVDEKGVR GDQPGFDKTR VKSYGLAGTD SGYGGFGQSQ WSPYTGSIGW
NFTDKNPWGA RFNFDDPKVQ KTIDWYFGLA KKGFMAPFAV AGNNTSGIGA DKQMSAGNAA
MALAGSFMIS SYFKLVDPQG KPLPIGLAPT PVGPSGKRAS MFNGLADVVS KQSKNPELAG
EWVAFLGSDA CQDIVGDSGA VFPARPNGMT IAKQRQAAAG VDITPFTMHV DDGTTFTIPV
TTDAADIVPL MQSAFDPIYL GSASGSSLST LNRQMNRLLE SNS
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