Gene Tpau_1580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1580 
Symbol 
ID9155730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp1646480 
End bp1647622 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content72% 
IMG OID 
Productglycosyl transferase group 1 
Protein accessionYP_003646540 
Protein GI296139297 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0360426 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAGG TGGCCTTGCT CTCGCACTCC GCGGCACCGT CGGGCGCCGA ACTCGCCTGG 
GCCCGCATGG CCCGGCGGTT CCCGCAGCAC GGTATCGAGC CGCTCGCCGT GCTCACCGAA
GCAGGCCCCC TGCAACAGAT CCTGGCGGAT GCGGGCGTCG AGGCGACCGT CGTCGACACC
GGATTCGCGA GCTCATCCGT GTCGATCGCC GGATCCCGTC TGCGCTGGAT CTCCGGTGCG
GCGCGGATGG TGCGGGCCGG ATGGCGCATC GGCGGCGTTC TGCGGGCAGC GGGCGCCGAG
GCCGTGCTCG CCGAGTCGAC CAAAGCGCTG TTGATGGGAA CGGTCGCTGC CCGCCGCGCC
GGGATCCCGC TGATCTGGCA CGTGCACGAT CGCATCAGCC CCGACTACTT CGGTCCCGTC
GCCCTCATCC TGCGAGCCCT GGGTCGCGTC GTGGCCCGGG GATTCATCGC GAACAGCCGC
ACCACCCGCG ACACCCTGTG GACCGGCAGC CGGCCGGCCG CGGTCGTCTA CCCCGGCGTC
GACCTGACCT CCGTTCCGGG GGGTGCGCCG CAGCGCGCAC CCGAAGAGGC GCGTGTGCTG
ATGCTCGGTC GCTTGGCGCC GTGGAAGGGG CAGGACCTCG TGCTCGAGGC CCTCGCGAGA
ACGCGCACCG AGAATGCCGT CCGATTCGTC GGTGGCACGC TCTTCGGCGA GCACGAGTAC
GCCGATCAGC TGCGCCGGCG GACCGCCGAG CTGGGACTCG GCGAGCGCGT GGAGTTCGTG
GGCAATGTCT CCGAGCCGCT CACCGAGGCC GCCGCCGCCG ATGTGGTGGT TCACTTCTCT
CGCCTCGCCG AGCCCTTCGG CCAGGTGGTC GTCGAGGCGA TGGCGGCCCA CTGCGCGGTG
ATCGCCGCGG CGAGCGGAGG CCCCACCGAG ATCATCGACG ACGGTGTCGA CGGCGTTCTC
GTCCCGACCG GTGATCCTGT GCTGCTGGCC GCGGCGATCG ACCGGCTGAT CGACGACCGG
GACCTGCGGA CCCGGCTCGC CGACAGAGCC GCGGCCCGCG CCGAGGACTT CGGCATCGAT
ACGTCCGCGG AGCAGGCGGC GCATCTGATC CACCGGACGC TCGACGGACG GCGGCCCCGA
TGA
 
Protein sequence
MTKVALLSHS AAPSGAELAW ARMARRFPQH GIEPLAVLTE AGPLQQILAD AGVEATVVDT 
GFASSSVSIA GSRLRWISGA ARMVRAGWRI GGVLRAAGAE AVLAESTKAL LMGTVAARRA
GIPLIWHVHD RISPDYFGPV ALILRALGRV VARGFIANSR TTRDTLWTGS RPAAVVYPGV
DLTSVPGGAP QRAPEEARVL MLGRLAPWKG QDLVLEALAR TRTENAVRFV GGTLFGEHEY
ADQLRRRTAE LGLGERVEFV GNVSEPLTEA AAADVVVHFS RLAEPFGQVV VEAMAAHCAV
IAAASGGPTE IIDDGVDGVL VPTGDPVLLA AAIDRLIDDR DLRTRLADRA AARAEDFGID
TSAEQAAHLI HRTLDGRRPR