| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1572 |
|---|
| Symbol | |
|---|
| ID | 9155722 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 1638708 |
|---|
| End bp | 1639517 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003646532 |
|---|
| Protein GI | 296139289 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00182797 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCCGC CCGTGCCTGA GAACCGGCCC GTGGGAGAGA TCCCCGGCCC GGAATCGAAT
TACCTGCCCC CCGTGCCCGG AATGCCGCCG ACCGTGTCCC TGCCGGACAC CGTCGACGAG
CCCCGGCGCC CTGGCCGCAT TCGGCAGCAG GACGAGTCGA CCGAGGCCCG GCCGGAGACG
GTGGCCGAGG CCCGCGCCCG CAACCGGGCG CAGCGCGAGC GCGCCGCGGA GCAGGAGCGG
CAGGCCCAGG AAGCCGCCGC CGCCCTCGCC AAGAAGGCGC GCCGCCGCAA GCAGATGATC
GGTGCAGGCG TAGGCGTCGG CGTGGTCGGC ACCATAGCAC TGCTGTACGC GGCGATCCCG
GACGACAACG GTGGGTCCGC GCAGCAGACC GTCAACGCGA GTTGCGTAGT GGGCGAGGGC
GACAACGCTC AGGTGGTCTC GGACAGCTAC TGCTCGACAG GTACCTACAA CCCGGTCACC
GGATTCATCC TGCTCAACGG CATGAGCTAC CGGTACAACT ACGGCGGCTC GGTATCCAAC
GGTCGGGTGG TGGGCGGCAC GTACGACCGC CCGACGAATG CCACCATCCG CACGCAGTCG
GGTGCGCCCG TCGACCCGGG CAAGGCGACG TCGTTCAACA ACAACGGCCA GACCAATGCG
GGTAGTAAGC CACCGGCGAA TTCGGGGGGC TCGAACAAGG GCGGCACCAA CGCCGGAAGT
AGCAACAACG GCAAGAACAT CGACCGCGGC GGCCTCGGCA CCTCGAACAA GGGCGGCTCC
AGCGGCGGCT CCAAGTCGAG CGGCTCCTGA
|
|---|
| Protein sequence | MQPPVPENRP VGEIPGPESN YLPPVPGMPP TVSLPDTVDE PRRPGRIRQQ DESTEARPET
VAEARARNRA QRERAAEQER QAQEAAAALA KKARRRKQMI GAGVGVGVVG TIALLYAAIP
DDNGGSAQQT VNASCVVGEG DNAQVVSDSY CSTGTYNPVT GFILLNGMSY RYNYGGSVSN
GRVVGGTYDR PTNATIRTQS GAPVDPGKAT SFNNNGQTNA GSKPPANSGG SNKGGTNAGS
SNNGKNIDRG GLGTSNKGGS SGGSKSSGS
|
|---|
| |