| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1562 |
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| Symbol | |
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| ID | 9155712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 1631582 |
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| End bp | 1633000 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | General substrate transporter |
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| Protein accession | YP_003646522 |
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| Protein GI | 296139279 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.503628 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATGC CTGATAACTC AACAACGTCC GGGAGTTCTC CGCTGTCCGC AGTGGGACTC
CAGGAGACCG AGCAGCAACG GAAGAGCAAG CTGCACAAAG CCATCGCAGC GTCTGCGATG
GGCAATTTCA CCGAATGGTT CGACTACGGC GTGTACGCCG CCACCACGGC CTACCTGACC
CAGGCGTTCT TCCCCGGAAC GCTCGGAACA CTGGGAACAC TGCTCGGATT CGCCGTATCG
TTCGCATTGC GCCCGCTCGG CGGCTTCGTC TGGGGGCCGC TCGGCGACCG ACTCGGGCGA
AAGGTCGTGC TGGCCACGAC CATTCTCCTG ATGGCCTCGG CGACAGCGCT GATCGGCGTA
CTTCCCACAC ATGCTCAAGT CGGGGTGCTG GCCCCGGTCC TGCTCATCGC GCTGCGCGTG
GTCCAGGGCT TCTCCACCGG AGGCGAGTAC GGCGGCGCCG CGACCTTCAT GGCGGAGTAC
TCGCCGGACG ACAAGCGCGG GCGATACGGG AGCTTCCTCG AATTCGGCAC CATGTGCGGT
TTCGCGGGCG GAACGGCCTT CGTGCTCGTG TTGCAGCAGT TGCTCACTCG CGACGAGATG
TACTCGTGGG GCTGGCGCAT TCCGTTCTTC GTGGCCATCC CACTGGGTTT CGTGGGCTGG
TATCTGCGGC ACCAACTCGA TGACACCCCG GTCTTCGAGG AGATGGCCGA CGAGCAGGAG
AAGCAAGGAT CCGCGTGGGA TCGCTTCACC TCCCTCATCC AGAACTATCG GCGCCCGATT
CTCATCATGT TCGGCTTGGT GATCGCGCTC AACATCGCCA ACTACACGCT GATCGCGTAC
ATGCCGACGT ACCTTCAGGG TTCGATCGGC ATGACCGAAT CCGACTCGTC GATCCTCATG
CTCATCGGTC AAGTGCTCAT GGCGCTGTGC ATCCCGTTCT TCGGCGCCCT CTCGGACCGC
ACCGGTCGCA AACCGATGTG GTGGATCAGC CTGATCGGCC TGTTGATCAT GGCCTATCCG
ATGTTCTGGC TGATGGGCCA GGGGTTCGGG TGGGCGATCG TCGGATTCGT GGTCCTCGGA
CTGCTGTACA TCCCGCAGCT GTCCACCATC ACCGCCACCT TCCCGGCGAT GTTCCCCACG
CAGGTGCGGT ATGCGGGCTT CGCAATCTCG TACAACGTGG CGACGGCGAT GTTCGGCGGC
ACCGCGCCAC TGGTCAACGA CGCGGTGGTG GAGAACACCG GGTGGCTGCA GTTCCCGGCG
TTCTACATGA TGGGGGCCTG CGTGATCGGT CTCATCGCCC TGCCGTTCTT GCAGGAGACC
AAGGGATGCT CGATCCGCGG CACCGAGGTC CCCGGACCGG ATACCAACGC CACCCGGCTC
GCCCAGATCG AGGAGGCGAA GCTCGCCGCA GCCGGCTGA
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| Protein sequence | MSMPDNSTTS GSSPLSAVGL QETEQQRKSK LHKAIAASAM GNFTEWFDYG VYAATTAYLT
QAFFPGTLGT LGTLLGFAVS FALRPLGGFV WGPLGDRLGR KVVLATTILL MASATALIGV
LPTHAQVGVL APVLLIALRV VQGFSTGGEY GGAATFMAEY SPDDKRGRYG SFLEFGTMCG
FAGGTAFVLV LQQLLTRDEM YSWGWRIPFF VAIPLGFVGW YLRHQLDDTP VFEEMADEQE
KQGSAWDRFT SLIQNYRRPI LIMFGLVIAL NIANYTLIAY MPTYLQGSIG MTESDSSILM
LIGQVLMALC IPFFGALSDR TGRKPMWWIS LIGLLIMAYP MFWLMGQGFG WAIVGFVVLG
LLYIPQLSTI TATFPAMFPT QVRYAGFAIS YNVATAMFGG TAPLVNDAVV ENTGWLQFPA
FYMMGACVIG LIALPFLQET KGCSIRGTEV PGPDTNATRL AQIEEAKLAA AG
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