Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_1547 |
Symbol | |
ID | 9155697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 1617015 |
End bp | 1617824 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003646508 |
Protein GI | 296139265 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.255418 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACCACGA TCGAACAACC CCTCCTCAAC ACGGTGGAGC ACCTAGGGCT GGCCGGCAAG ACCGTGCTCA TCACCGGTGC GACAGCCGGA ATCGGCCGAG CGGCGGTCGA CCGTTTCGCC GCCGCAGGCG CCAATGTCGT CGCCACCGGA CGGGCCGAGG CGGGACTCGG GGCGATCATC GAGGCGTCGC GCCAGCACCC GGCGGGGGCC GGACAAGTGC GGGTCGTGCG CTGCGACGTG GCGTGCGACG ACGACGTCGC GCACGCGGTG GGCTACGCGG TGGCCGAGTT CGGTTCCCTC GACGTGGCGT TCAACAACGC CGGCACCTTC GGCCGATTCG CGCCGATTCA CCAGGACGAC GAGGCCAATT TCGACACCGT GATCGGGACC AACCTGCGAG GGGTCTGGTC CTGCATGCGG CACGAGGTCA CTGCGATGCT CGCGAACGGT GGCGGCTCGA TCGTCAACAC CGCCTCGGTA GCCGCACACC TCGGGCACGC GAAGAGCGCC CTGTACTCGG CTACCAAACA CGCGATCCTT GGATTGACCA AGTCCGTCGC GCTCCAATAC GCGGACCAGG GCATCCGGGT CAACGTGCTC AGCCCGGGCT CCACGGACAC CGAGATGCTG CGGTCGATCT ACCCGGACGC GGAGACGATC AACGCGCGGA AGCGCCGAGC CCCGATGCGG CGCCTCGGCG AGCCGACCGA GCTCGCCGAC GCGGCACTGT TCCTCGCCAG CCCGTTCAGC GCCTATGTGA CGGGCCAGGC GCTCGTCGCC GACGGCGGCG TCATCGCCGG ATCGGCCTGA
|
Protein sequence | MTTIEQPLLN TVEHLGLAGK TVLITGATAG IGRAAVDRFA AAGANVVATG RAEAGLGAII EASRQHPAGA GQVRVVRCDV ACDDDVAHAV GYAVAEFGSL DVAFNNAGTF GRFAPIHQDD EANFDTVIGT NLRGVWSCMR HEVTAMLANG GGSIVNTASV AAHLGHAKSA LYSATKHAIL GLTKSVALQY ADQGIRVNVL SPGSTDTEML RSIYPDAETI NARKRRAPMR RLGEPTELAD AALFLASPFS AYVTGQALVA DGGVIAGSA
|
| |