Gene Tpau_1540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1540 
Symbol 
ID9155690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp1610811 
End bp1612184 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content63% 
IMG OID 
ProductIntegrase catalytic region 
Protein accessionYP_003646502 
Protein GI296139259 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.790818 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCATTCAC CGATGGTGAA GAAGAGGTTC TTCAAGGAAT TGGACGTGTC TGACGGCAAT 
GTGTCGGTCG CTGCTAGGGC GGCGGGGGTG ACAGTGAATA CGGCGTTTGG ATGGATGCGC
AGGGCGGGCC TGCGTGGACG TGGGAGCACT AGCAATGGTG GTCATCCCGG CCGGGCCGAG
TACGACCGGC TTCGCCGTGA GGGGGTGCTG CGGCCGGACG CTGCTCGGCG TGTCGGTGTC
AGCGTTCGCA CTGCTGGGGA CTGGGATCGA GGGGTGCGCA AGATTGGCGA TACTCGTATC
CATCCCGACG GACGCAAGAT CGATTACCTG ACAGGTGCGG TCACGTGGGT CGGAGTGGAA
TCGGATGCAC CGAGGCAGCG GAGCCTGCAT CCACGGTTTC TGACCTTGAC CGAGCGGGAA
ACTATCGCTG ACATGCGCCG CGAGGGGGCA TCGCTGCGGG CCATCGGCAG GGAGCTCGGC
CGGCCAGCAT CGACGATCAA ACGGGAGATC GACGCTGGCG TTGTCAACGG TGCCTATCGC
CCGCATCAGG CGCACCGCAG GTGGGAAAAG AGCCGGTCAC GGCCGAAGCC AGCGAAACTG
GCCCAGGCCG GTCCGCTGCG GGACTACGTC GAGAACAAAC TGCAGGACCA GTGGTCCCCA
GAGCAGATAT GTCACTCTCT AGTGACCGAG TTCCCCAACG AGCAAAGTAT GCGTGTGAGC
GTCGAGACGA TCTACCAGTC GATCTACGTT CAGGCTCGGG GCGGCCTGCG CCGTGAAGTC
GCGATGGCCT TGCGAACGGG CCGCACCCGC CGCAAGCCCC ACCGCCGCGC CGAACATCGC
ACCAGACGAT TCGTCGACAA GATGGTGATG ATCTCCGACC GGCCCGCCGA GGTCGAGGAT
CGAGCCGTGC CAGGCCACTG GGAAGGTGAC CTGATCGTCG GTACTCGCAG CGAGTCCGCG
ATCGTCACAC TCGTCGAACG CTCCACCCGC TACGTCATGC TCGGCCACCT GCCTGGCGGC
CACTCCGCCG AAGAAGTCCG TGACGTGCTG GTTTCGTTGA TCGGAAATCT CCCAGGACAT
TTGCGGGGAT CACTGACCTG GGACCAGGGC TGCGAGATGG CCGCCCACCA ACAATTCACG
GTCGCCACCG GGGTTCCGGT CTACTTCTGC GATCCCCACT CACCCTGGCA GCGCGGAAGC
AACGAGAACA CCAATGGACT ACTGCGCCAG TACTTCCCGA AAGGCACCGA CCTGAGCGCC
TACGGCCGCG AAGACCTCGA ACTCGTCGCC CAGAAACTCA ATCGCCGACC ACGCAAAACG
CTCGGCTGGA AGACACCAGC CGAGCGTTTG CGTGACCTCA TTACAGCTCG CTAG
 
Protein sequence
MHSPMVKKRF FKELDVSDGN VSVAARAAGV TVNTAFGWMR RAGLRGRGST SNGGHPGRAE 
YDRLRREGVL RPDAARRVGV SVRTAGDWDR GVRKIGDTRI HPDGRKIDYL TGAVTWVGVE
SDAPRQRSLH PRFLTLTERE TIADMRREGA SLRAIGRELG RPASTIKREI DAGVVNGAYR
PHQAHRRWEK SRSRPKPAKL AQAGPLRDYV ENKLQDQWSP EQICHSLVTE FPNEQSMRVS
VETIYQSIYV QARGGLRREV AMALRTGRTR RKPHRRAEHR TRRFVDKMVM ISDRPAEVED
RAVPGHWEGD LIVGTRSESA IVTLVERSTR YVMLGHLPGG HSAEEVRDVL VSLIGNLPGH
LRGSLTWDQG CEMAAHQQFT VATGVPVYFC DPHSPWQRGS NENTNGLLRQ YFPKGTDLSA
YGREDLELVA QKLNRRPRKT LGWKTPAERL RDLITAR