| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1424 |
|---|
| Symbol | |
|---|
| ID | 9155573 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 1491765 |
|---|
| End bp | 1492412 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | Resolvase domain protein |
|---|
| Protein accession | YP_003646391 |
|---|
| Protein GI | 296139148 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00141617 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGATGT TCGAGTACAG CCGCGTGAGC ACCGAGGAAC AGGCCGAAAG CCACAACGGG
CTAGAGGCCC AGCGCGCCAT GATCCGCGAC GAGGCACAGC GACGCGGCTG GGAACTGGAA
GCGTTCACCG ACGAAGGCGC GAGCGGCAGC CAGATCAACC CAGGCTTAAG GACGGCGCTG
GAGCTACTGG CATCTGGCCA AGGTGACGGC CTCGTGGTGG CGAAGATGGA CCGGCTCGCA
CGTTCCGTCG CGCACGCCGT CGAAATTATG GAACTCGCCA AGGCCCAGGA CTGGGCGCTT
GTCATTCTCG ACCTCAATGT CGACCTGACC ACCCCGGCCG GTGAGGCGAT GGCGAACATG
CTCGCTGTGT TCGCTCAGTT CGAGCGGCGC ATGATCTCCA CGCGCACCCG TGACGCCCTC
GCAGCCAAGA AGGCGCGCGG CGAGCGCATT GGCCGGCCAC GCCTAGCACC CGCAGGCGTC
GTGCGGCGGA TCGTGATGGA CCGCAACGCA GGCCTGAGCT TCGGACGGAT CGCCCGCGCG
CTGGAAGCGG AAGGCGTGCT CAGCCCCGCA GGCCGCACCA CCTGGCAGGA ATCGACAGTG
CGACGGATCT ACGCGTCAGC GACCGCAGAC ATTCGAGAGG CGGTGTGA
|
|---|
| Protein sequence | MLMFEYSRVS TEEQAESHNG LEAQRAMIRD EAQRRGWELE AFTDEGASGS QINPGLRTAL
ELLASGQGDG LVVAKMDRLA RSVAHAVEIM ELAKAQDWAL VILDLNVDLT TPAGEAMANM
LAVFAQFERR MISTRTRDAL AAKKARGERI GRPRLAPAGV VRRIVMDRNA GLSFGRIARA
LEAEGVLSPA GRTTWQESTV RRIYASATAD IREAV
|
|---|
| |