Gene Tpau_1422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1422 
Symbol 
ID9155571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp1489530 
End bp1490237 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content55% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003646389 
Protein GI296139146 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.00171522 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTTAC AAGGCACTTG GAGATGGTGG AAGCAGTGGA CGCTTCAGCC AAGGCGATTG 
CGGAAGCCGA GTTGGTCACA GACCGGCTAT GCGCGAGCCC TGGCGACGCT GATGCGCATC 
AGCTGCTTAT TGGCGTTTCG AAGCAGCTAT CTGTTGTTGC CAGCACGCTC AACACGCAAC 
TCTCAGTGGC TGGCGTTCAC ACGTCGGAGT GGCGTCGCAT CGACGCGGAA GTCATTGAAG 
GTGTTCTGCG GGGAACCGAC GAAGACACGG AAGAGGAGTA ACATGTCAGA CCAGCCTGGG 
AACAGCGAAG CGGATAGCAA ACCCATTACA GGATTTGTAG CAAGAATCAT TGACGACTTT 
TCGCTCGTCA TCAACCGCGG CTCCAAGCAT GGGGTGCGCA CTGGAATGAA ATTTGAGGTT 
CTCGACACCG ATTGGGCGGA CATCGTGGAC CCGGAAACCG ATGAAGTTAT CGGGTCAATG 
CCAATGGTTA AAGCAACCCT GAAGGCTTCG GATGTATACG AGAAGATGGC AGTTCTCGAA 
ACGTTTGGGC GCGTAACAGT TGGTGGAATG ACCCCACTCG GAGAAGCTTT TGGCCCGAGG 
GTTGAGCGGC GCGAAAGGCT CAAATTTTCG GGCAAGTCAC TTGCCGAGGA AACTAAGAGC 
ATTCTCGTTG GCGACGAAGT TGAGCAGGTA ATCGTCGGGT CACGCTAA
 
Protein sequence
MRLQGTWRWW KQWTLQPRRL RKPSWSQTGY ARALATLMRI SCLLAFRSSY LLLPARSTRN 
SQWLAFTRRS GVASTRKSLK VFCGEPTKTR KRSNMSDQPG NSEADSKPIT GFVARIIDDF 
SLVINRGSKH GVRTGMKFEV LDTDWADIVD PETDEVIGSM PMVKATLKAS DVYEKMAVLE 
TFGRVTVGGM TPLGEAFGPR VERRERLKFS GKSLAEETKS ILVGDEVEQV IVGSR