Gene Tpau_1406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1406 
Symbol 
ID9155554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp1474251 
End bp1474943 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003646373 
Protein GI296139130 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.950523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGATTC CGAAGGCGCT GATCGCACCG GCCCGACTGG GCCTGGCCGC CGCAGGTTTG 
GGGCTCGCCG CGGCTGAGCA GACCGCGTCG ATGGCACGCG ATGTGGTGGG TATGGCCGCG 
GAGAAGCTCG ACCCCGACGC TCCCGCCGAT ACCCGGCACG AGAACATCGT GACCGCCGTG 
CAGCGGGTGC CGTTCATCGT GCACCGCGTC TCGGACCTGC TCAGCGCGGG TAGCGCGATC 
GACCGCCTGA TCGGCGAGGG CGGCGCGGGC GACCGGGTGG CCGACCTGTT CGAGGAGGAC 
GGGCCGGTCG ATCGGGTGAT CAAGCCGGGC GGGCCGCTCG ACCGGGCCAC CCGCGAGGGC 
GGCATCGTCG AGACCCTCAC CGCCGAGGAG GGGGTGGTGC AACGGCTGGC CGAGATGACC 
GATGCGCTGA ACCGGCTCAC CCCGACGATC GCGGCGATGA ATCAGCGGAT CGTCGATATC 
GAGGGCGTGG TCGGTGCCGC CAACACCGTT GCCGAGCCGG TCGGCGACCT GCTCTCCAGC 
CTGCCGAAGT TCGCGCTGCG CACGGCGAGC GAAGTGGCCC GGGCGGCGGG TCAGCCGCCG 
CGGCGCCCTC GCCCCTCGCC GATCGTCGAT GCCGGGCTCA CGGAGATCGC CGATGTCGAG 
ATCACCGAGA TCGGCGACGC CGAGGGCCGC TGA
 
Protein sequence
MEIPKALIAP ARLGLAAAGL GLAAAEQTAS MARDVVGMAA EKLDPDAPAD TRHENIVTAV 
QRVPFIVHRV SDLLSAGSAI DRLIGEGGAG DRVADLFEED GPVDRVIKPG GPLDRATREG 
GIVETLTAEE GVVQRLAEMT DALNRLTPTI AAMNQRIVDI EGVVGAANTV AEPVGDLLSS 
LPKFALRTAS EVARAAGQPP RRPRPSPIVD AGLTEIADVE ITEIGDAEGR