Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_1385 |
Symbol | |
ID | 9155533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 1453651 |
End bp | 1457865 |
Gene Length | 4215 bp |
Protein Length | 1404 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | NAD-glutamate dehydrogenase |
Protein accession | YP_003646352 |
Protein GI | 296139109 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.6028 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCGCTGT CCGCGATCGA CCAGTCCGCC TTTCCCCGCA CCGCTGCCGC GGTGACGGCG CAGCCGCCGG GACGGTCCCC GTCGGACTTC ATGACATGGC TCGCGGACGG GAACGCCAGG GTGCTCGGGA GTTGGAGCGA CGGTGCGGGC ACCGGGGTAC TCAGCGACCC GGCGCCGCAG GTACGCGCTG TGCTCGACGC GTTGCCCGCG CCGGCGGCCG GAGACATCGC GGTGATCGAA CTGGCGCAGC CCCTCGGTGA TGCCGCCGGC GCGCCCTTCC TGCTCAATGC GACTCCCGCC GACGGCGGCG CCACTGTGTG CTACGCGATG GCGCTGACCG TTCTGGGCCT GCACGACAAC GTCTTCGACA TCCCGATGGT GGGGGCGAAG ATCGAGCGGG TGCTCACCCG GATCGGCGTC GACCCGGCGG ATTCGGCGAA CCAGCGTCTG ATGGAGTACA TCCAGACGTT CCCGCGGCTG CGGCTCATCG TGGGCGATGA GGACGAACTG GCGCGGGTGT TCGGGGGGCT TCGTGAACTG AGCGACGGCG ACCTCGCTCT GTTCCTGCGT ACCGACAAAC TGGCTCGGTT CGCGACCGCG CTGGTGTATC TGCCGCGCGA TCGTTACACC TCCCGCGCCC GGGGTGTCCT GATCGATGTG CTTGAGGACG AGACCGGTAT GCGGGTCGAC CGGTTCACCG CCCGGGTTAC TGAATCCGCC ATCGCTCGAA TTCAATTCGT GTTGCTCCCG CGCGACGAAT CCGCGGTCCC GGTATTCCGC GCGGACGACG AGGCCCGGAT CCGCGGACGG CTCGGCGAGG CGAGTCGCAC ATGGGACGAG GATGTCCTCG CCGCGGCCGC GGCCGCAGGT GCTGATGTGG AGACGGTGCG CACCTACCTC CCCGGGTTCT CACCGAATTA CAAGGAGGAT CAGGCGCCCG AGCTCGCGCT CGCCGATGTC ACCCGGATCG ACGGGCTCCC GGCCGAGGGA ATGGACCTGG TCTTCTACGA TCCGCCCGGC GAGGAGACCG GCCTGCGCTT CGCCATGTTC CTCACCGGTG GCCGGGTGAC CCTGTCCCAG CTGCTCCCGG TGCTCCAGTC GTTGGGGGTC GAGGTGCTCG ACGAGCGGCC GTACACGGTG CGCCGTCCCG ACGGAGTGAC CTGCACCGTC TACGACTTCG GCCTGCGGGC CCCGAAAGCG CTGCGTGACG CGGCTGTCGC CGGAGTCGCC GATGCCGACC TCGAGGCGCA CCTCGCCGAG CGCCGGAAAC TGGCCAGCGC CGGTGCCGCG GCGGTATGGC GCGGCGAGTG CGAGGTGGAC CGGTTCAACG AATTGATCCT CGCTTTCGGT CTGGACTGGC GCCGGGTGGC ACTGCTCCGC GCCGTCGGCC AGTACCTGCG GCAGTGCGGA TTCGGGTACA GCCCCGGGCA CATGGCACAG GTGCTGCTCG ACCACCGCGA TGCCGTGCTC GCGCTCCAGC GGCTGTGGGG CGCGACGTTC GACCCGGTGG CTGCCGACGC CGATGCCGCC GCGCAGGCCG AGGCCGATGT GCAGACGGCG CTGGCAGCGA TCACCAGCCT CGACGCCGAT CGGATCCTGC GGGCGTACCT GCACGTGGTG CAGGCGACGG TGCGCACCAA CTTCTATGCC GATAAGCCGG TGATCTCGCT CAAGGTGGAG CCGGGCCGCA TCCCCGAGGC GCCGAAGCCG AGGCCGCGGT TCGAGATCTT CGTCTACTCG CCGCGCGTGG AGGGCGTCCA CCTGCGGTTC GGCATGGTGG CCCGCGGCGG CCTGCGCTGG TCGGACCGCC GCGAGGACTT CCGCACCGAG ATCCTCGGAC TGGTCAAGGC CCAGGCGGTC AAGAACGCGG TGATCGTGCC CGTCGGCGCC AAAGGCGGCT TCGTGGTGAA GAACCCGCCC GAACTCACCG GCGACATCGC GGTCGACCGC GAGGCCCAGC GCGCTGAGGG CGTGGCCTGC TACCGGTCGT TCATCTCGGG ATTGCTCGAC GTGACCGACA ATTTGGGCCC CGACGGCGAG GTGTTGCCTC CCGAGCGAGT GGTGCGTCGC GATGGCGATG ACACCTACCT CGTGGTGGCC GCCGACAAGG GCACCGCATC GTTCTCCGAT ATAGCCAACG ACGTGGCCGA TGGCTACGGC TTCTGGCTCG GCGACGCCTT CGCCTCCGGC GGGTCGGAGG GCTACGACCA CAAGGGCATG GGCATCACCG CCCGAGGTGC CTGGGAGTCG GTGAAGATGC ATTTCCGGGA GATGGGTGTC GACACTCATT CCGAGGACTT CACCGCTGCG GGTGTCGGCG ATATGAGCGG GGACGTGTTC GGCAACGGCA TGCTGCTCTC CGAGCACATC CGCCTGGTCG CCGCGTTCGA CCATCGCGAC ATCTTCCTCG ATCCGAACCC CGATGCCGCA GTGGGATTCG CCGAGCGGCG TCGTCTGTTC GACCTGCCGC GCTCGTCGTG GAAGGACTAC GACACCGACA AGATCAGTGC CGGCGGCGGC GTTTTCAGCC GTGATCAGAA GTCGGTGCCG ATCAGCCCCG AGGTGCGCGC CGCCTTGGCG TTGCCCGACG GTGTCACCGA GATGACCCCG CCCGAGTTGA TCCGGGCCAT CCTGCTGGCA CCGGTCGACC TGCTGTGGAA CGGCGGCATC GGCACCTACG TCAAGGCCTC GACGGAGACC GATCTCGCGG TCGGCGACCG CGCCAACGAC GCCATCCGTG TCAATGGTAA TGAGTTGCGC GCCAAGGTGA TCGGTGAGGG TGGCAACCTC GGAGTCACGC CGCTGGGACG CATCGAGTTC GACCGCAGTG GCGGCCGGAT CAACACCGAC GCCCTCGACA ACTCCGCCGG CGTGGACTGC TCCGACCACG AGGTGAACAT CAAGATCCTG CTGGACCGGC AGATCGCCGC AGGTGCGATC GCCGGGGACG AGCGGCACGA TCTGCTGGTC TCGATGACCG ACGACGTCTC CCGTCTCGTC CTGGCGGACA ACGTCTCCCA GAATCTCGCT CTGTCCGTGG AGCGCGCCCT GGCGCCGAAG ATGGTGGACG TGCACGCCCG GATCCTGGCG GACCTGTCCC GCAATCGTGG TGTCGATCTG CGGTTGGAGG CATTGCCCAC GCGCAAGGAG ACCGACCGGT TGCAGGCCGC GGGGCAGGGA CTCAGCTCGC CCGAACTGGC GAACCTGATG GCGCACGTGA AGCTCGCGAT CAAGGACGAC CTCCTGGCCG GTGACCTTCC TGACAACGAT GCGCTCGCCG CCCGCCTGCC CGGCTACTTC CCGGATCGGC TGCGCGACCG CGCCGGCGAT GCCGTCTTCG CCCATCCGCT GCGCCGTGAG ATCGTGGCGA CCCAGGTGGT CAACGAACTG GTGGACAACG CGGGCGTGAG TTTCGGATAT CGCCTCTCGG AGGAGACCGG TGCCAGTGCG AGTGATGCGG TGCGCGCCTT CGTCGCCGTG AGCCGGGTCT TCGACCTGCC CACCACGTGG TCCGAGATCC GGGCGCTTCC GGTGTCCGCC GCCGAGACCG CGGCGCTGCT CGCCGAGAGC CGGCGGGTGC TCGACCGAGG TGCCCGCTGG ATGCTCAACA GCCGGCCGCA GCCCATCGCG ATCGGCGCCG AGGTCAATCG GTACGCCAGC CGGATCGCGG CACTGTCGGC GGCGATGGGC GAGTGGGGAA TCGAGTACGA CTCGCAGGCC CGTGCCTCTG CTGATCGGGC CGAATCCGCA GGCGTTCCGA GCGAGTTGGC GTTGAGCGTG AGCCGTGCGC TGTATCGGTT CAGCCTGCTC GACGTCGTCG ATATCGCCGA TATCACCGAG CGTGAGGACG ACGAGGTCGG GCAGCTCTAC TTCGCGATGA TGCAGCACCT GCGGGTGGAT CGGATGTTGG GGGCCGTCGC GGAATTGCCG CGTGGCGACC GATGGAGCGA AATGGCGCGG CTGGCACTGC GTGATGATCT GTACGGCGCG TTGCGGGCCC TGACGATCGA GGTGCTCAAC TTCACCGATC CGGGGGAGCC CGCCGACCAG AAGATCGCCG ACTGGGAGTC GCACAATTCC CGCAGCCTCG AGCGGGTGCG CTCGCTGCTC GCGGAGATCC TCGATGCCGA GGAGGGCGAG CCGCCGGCGA ATCAGGAGTC GATCCTCTCG GTGGCCACGC GGGCCCTGAG GTCGGTGTTG CGCAGCGTCG GCTAG
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Protein sequence | MALSAIDQSA FPRTAAAVTA QPPGRSPSDF MTWLADGNAR VLGSWSDGAG TGVLSDPAPQ VRAVLDALPA PAAGDIAVIE LAQPLGDAAG APFLLNATPA DGGATVCYAM ALTVLGLHDN VFDIPMVGAK IERVLTRIGV DPADSANQRL MEYIQTFPRL RLIVGDEDEL ARVFGGLREL SDGDLALFLR TDKLARFATA LVYLPRDRYT SRARGVLIDV LEDETGMRVD RFTARVTESA IARIQFVLLP RDESAVPVFR ADDEARIRGR LGEASRTWDE DVLAAAAAAG ADVETVRTYL PGFSPNYKED QAPELALADV TRIDGLPAEG MDLVFYDPPG EETGLRFAMF LTGGRVTLSQ LLPVLQSLGV EVLDERPYTV RRPDGVTCTV YDFGLRAPKA LRDAAVAGVA DADLEAHLAE RRKLASAGAA AVWRGECEVD RFNELILAFG LDWRRVALLR AVGQYLRQCG FGYSPGHMAQ VLLDHRDAVL ALQRLWGATF DPVAADADAA AQAEADVQTA LAAITSLDAD RILRAYLHVV QATVRTNFYA DKPVISLKVE PGRIPEAPKP RPRFEIFVYS PRVEGVHLRF GMVARGGLRW SDRREDFRTE ILGLVKAQAV KNAVIVPVGA KGGFVVKNPP ELTGDIAVDR EAQRAEGVAC YRSFISGLLD VTDNLGPDGE VLPPERVVRR DGDDTYLVVA ADKGTASFSD IANDVADGYG FWLGDAFASG GSEGYDHKGM GITARGAWES VKMHFREMGV DTHSEDFTAA GVGDMSGDVF GNGMLLSEHI RLVAAFDHRD IFLDPNPDAA VGFAERRRLF DLPRSSWKDY DTDKISAGGG VFSRDQKSVP ISPEVRAALA LPDGVTEMTP PELIRAILLA PVDLLWNGGI GTYVKASTET DLAVGDRAND AIRVNGNELR AKVIGEGGNL GVTPLGRIEF DRSGGRINTD ALDNSAGVDC SDHEVNIKIL LDRQIAAGAI AGDERHDLLV SMTDDVSRLV LADNVSQNLA LSVERALAPK MVDVHARILA DLSRNRGVDL RLEALPTRKE TDRLQAAGQG LSSPELANLM AHVKLAIKDD LLAGDLPDND ALAARLPGYF PDRLRDRAGD AVFAHPLRRE IVATQVVNEL VDNAGVSFGY RLSEETGASA SDAVRAFVAV SRVFDLPTTW SEIRALPVSA AETAALLAES RRVLDRGARW MLNSRPQPIA IGAEVNRYAS RIAALSAAMG EWGIEYDSQA RASADRAESA GVPSELALSV SRALYRFSLL DVVDIADITE REDDEVGQLY FAMMQHLRVD RMLGAVAELP RGDRWSEMAR LALRDDLYGA LRALTIEVLN FTDPGEPADQ KIADWESHNS RSLERVRSLL AEILDAEEGE PPANQESILS VATRALRSVL RSVG
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