| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1370 |
|---|
| Symbol | |
|---|
| ID | 9155518 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 1431014 |
|---|
| End bp | 1432201 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | Acyl-CoA dehydrogenase type 2 domain protein |
|---|
| Protein accession | YP_003646337 |
|---|
| Protein GI | 296139094 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCCTGG CGCCCGCGAT CGATTCCGCC GAGGCCGCGT TCGAGTCGGC GCGGCACCTG
GCGAGCCGGT TCGCCGCGAC TGCGGCCGAC CGGGACCGCG AGCGGCACCT CCCGCACGCC
GAAGTCGAGT ATCTCTCCGA CGCAGGCCTG TTCGCGCTCA CCGTGCCCGC GCGATTCGGC
GGCCCCGATC TGCCACCCTC CGCGGTGGCA GAGGTGTTCC GCATCCTGGC CACTGCGGAC
GGTTCGCTCG CCCAGATCCC GCACAGCCAC TACGTGTACC TCACCGCGCT GCGTCTCGCG
GCGCCGGAGG ACTTGCAGCG CACCCTGTTC CAGCAGGTCC TCGACGGCGG ACGGATCGCC
AACGCCCAGT CCGAGAAGGG GGGTCGGACG GTCGCCGATA TCGCGACCAC GCTCACCCGC
TCCGCTGACG GTGCCCGTCT GGACGGCGAG AAGTTCTACT GCACGGGCTC TCCCTACGCG
CACATCCTCG CGGTCCTGGC TCGCGACGCG GACTCGGGAG AGCAGGTCAT CGCTTTCGTG
CCCGCGGATA CCCCCGGAAT CACGGTGGTG GACGACTGGA ACGGGCTGGG GCAGCGCACC
ACGGGGAGCG GCACGGTCCG GTTCGTCGAT GTTCCGGTTC CGCCCGGCTC GATCGTTCCG
CGCTCCCCCG CCGTGTCCGA GCCCACCGGA TACGGCGCCT TCGCCCAGCT GCTGCACGTC
GCCATCGATA CGGGACTCGC CCGCGGCGCA CTCGAGGCCG CGGCCGAGTT CGTCCGCACC
ACGTCCCGGC CGTGGTTCGA GGCGGACGTC GACCGGGCCG AGGACGATCC TCTGGTGATC
CAGCGATTCG GCGAACTCAC CGTGACGGTC CGCGCCGCGG AGGCCGCGCT CACCGTGGCG
GGCACTGCGG TGGACACCGC CTTCCAGGTT CCGGGGCTGG AGCAGGCCGC AGCGGCATCG
CTGGCCGTGG CCACGGCCAA GGTGCTCGCC GATCGCGCGG CGACGGAGGT ACCGTCGGCG
CTGTTCGAGG TGAGCGGCAC CCGGAGCGCG GGTGGCGACC TCGGACTTGA CCGGTTCTGG
CGGGACGCCC GCACGCACAC GCTGCACGAT CCGGTGCGCT ACAAGGTGCA CCATCTGGGC
CGCAGCACCC TCAATCGAGT GCCGCCGCCG TTGCACGGCG TGCTCTGA
|
|---|
| Protein sequence | MTLAPAIDSA EAAFESARHL ASRFAATAAD RDRERHLPHA EVEYLSDAGL FALTVPARFG
GPDLPPSAVA EVFRILATAD GSLAQIPHSH YVYLTALRLA APEDLQRTLF QQVLDGGRIA
NAQSEKGGRT VADIATTLTR SADGARLDGE KFYCTGSPYA HILAVLARDA DSGEQVIAFV
PADTPGITVV DDWNGLGQRT TGSGTVRFVD VPVPPGSIVP RSPAVSEPTG YGAFAQLLHV
AIDTGLARGA LEAAAEFVRT TSRPWFEADV DRAEDDPLVI QRFGELTVTV RAAEAALTVA
GTAVDTAFQV PGLEQAAAAS LAVATAKVLA DRAATEVPSA LFEVSGTRSA GGDLGLDRFW
RDARTHTLHD PVRYKVHHLG RSTLNRVPPP LHGVL
|
|---|
| |