Gene Tpau_1247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1247 
Symbol 
ID9155388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp1281711 
End bp1282928 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content68% 
IMG OID 
ProductGlycosyl transferase, family 4, conserved region 
Protein accessionYP_003646217 
Protein GI296138974 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.910947 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCACATCG AGGCGGCGGG CGGAGCGGTC ATCGGGACCG GCGGCGCCGG CATACCGATG 
CGCGAATTGC TGGTAGTGGG ATTGACTGCT GCAGTTGTCA CATTCTTCGC CACGTCCCTC
GTGCGCGTTC TCGCGACCCG GTTCGGGGCC GTCGCGGTGC CCCGCACCCG CGACGTCCAC
GTCGTCCCGA CGCCCCGTCT CGGCGGCGTG GGCATCTATA TCGGGCTCGC TCTCGGCATT
TTCGTCGCAG CCCAGCTGCC GGCACTGACC CGCGGCTTCC TCTACTCCCG CGACGTGGTG
GCCGTGGTGG TCGCAGGCGG GGTCATCGTC CTCGTCGGGG TGATCGACGA TCGGTGGGGC
ATCGACGCGC TCACCAAGCT CGTCGGGCAG ATCTTCGCGG CGGGCGTGCT CGTGGTGATG
GGTGTGTCCT GGAACGTCAT CTACAACCCG ATCGCCAATA CGACGGTGGT TCTCGGCCAG
CTGGAGGCGG GCCTGCTGAC GGTGCTGCTC ACCGTCGCGA CGATCAACGC GCTCAACTTC
ATCGACGGGC TCGACGGCCT GCTGGCCGGT GTCGCGGCGA TCGCTGCGCT GTCGATCCTG
GTGTTCTCGG TCGGTCTCAT GCTCGACTCC GGGGGCGACG CGCCGTCGTA CCCGCCCGCG
ATGATCGCGG CCGCATTGTT CGGTGCGTGT ATGGGCTTCC TGCCGCACAA CTTCCAACCG
GCGCGCATCT TCATGGGTGA CTCGGGTTCG ATGCTGCTGG GTCTGACCCT GGCTGCGGCG
GCCACCTCGG CCACGGGGCG GATATCCGCC AATGCCTACG GCGCGACCGA CATGTTCACC
CTCCTGCTGC CGCTCCTGCT GGCCGTCGCG GTGATGTTCG TGCCGATGCT CGACCTGCTG
CTCGCGGTGG TGCGCCGCAC GCGCGCCGGG GTGCACCCCT TCACGGCCGA CAAGATGCAT
CTGCATCACC GACTGCTGCA GTTGGGCCAC AGCCAACGCC GCGTAGTGGT GGTCATTTAC
CTGTGGGTGG GTGTGCTGGG CCTGAGTGCC GCGGCGTCCA CGCTGCTGCC GCCCACGCTG
ATCGCGCCGC TGTTCGGGGC GGGCCTGCTC AGCGCGCTCG TCTTCACAGT CGTGCCCCGA
ATCGTGCCGA GGCTGCGGGA ACGCTACTCC GAAACCCGGA GGTCAGGCGT ATCGTCCGGC
GGGAGTACCC GGTTATAA
 
Protein sequence
MHIEAAGGAV IGTGGAGIPM RELLVVGLTA AVVTFFATSL VRVLATRFGA VAVPRTRDVH 
VVPTPRLGGV GIYIGLALGI FVAAQLPALT RGFLYSRDVV AVVVAGGVIV LVGVIDDRWG
IDALTKLVGQ IFAAGVLVVM GVSWNVIYNP IANTTVVLGQ LEAGLLTVLL TVATINALNF
IDGLDGLLAG VAAIAALSIL VFSVGLMLDS GGDAPSYPPA MIAAALFGAC MGFLPHNFQP
ARIFMGDSGS MLLGLTLAAA ATSATGRISA NAYGATDMFT LLLPLLLAVA VMFVPMLDLL
LAVVRRTRAG VHPFTADKMH LHHRLLQLGH SQRRVVVVIY LWVGVLGLSA AASTLLPPTL
IAPLFGAGLL SALVFTVVPR IVPRLRERYS ETRRSGVSSG GSTRL