Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_1180 |
Symbol | |
ID | 9155320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 1206735 |
End bp | 1207574 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003646150 |
Protein GI | 296138907 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCACCG GCGCCTCGCA GGGATTCGGG CGCGATATCG CGGCAGAGGT GTTGGCGCGG GGGCACACCG TCATCGCCAT TGTGCGCGAC TCCTCGCGGG TCGTGGATCT TGTCGCCGCG AACCCGGGCC GCGTGGAGGT GGTCGAGGCC GACCTGGCAC AGCAGGAGGG AGTCGATCAT GCAGTGATGA TCGCGCGCGA CCGCGAGGTC GGCGTCCTGG TCAACAATGC CGGACGCGCG ATCTGCGGTG CTGCTGAGGA GGTTTCGATG AGCGATCTCC GCGCTCAATT GGAGCTGAAC TTCTTCGCCG CTGCCGCCCT CACCCGAGCG GTACTTCCGG GCATGCGGGC CCAGGGATAC GGCACCGTCG TGCAGTTGAG CAGTCAGGGT GGAAGATTGT CGTTTCCCGG CGTCGGCGCA TACTCGGCGA GCAAGTTCGC ACTTGAGGGA TGGAGCGAGG CGCTCGCAGG CGAGGTGGCG CCGCTGGGGA TCCGGGTCAT GCTGGTCGAA CCGTCACGGT TCCGCACTGG CTTCAACACC ACTCGGTCCC TGGGCTTCGC GGAGCAGTCC GGCGTGTACG CGAGCACCGT GGGACGGGTC GCTGCCGATC TCGCGGGCGT CGACGGACGC CAGGAGGGCG ACCCGGTGCG GGCTGCGCGC ATCATCGCCG ACATCGTTGC GTCGGCCGAG GTCCCGTTGC GACTACCTCT GGGGGCCGAG GCCGTCGACC GCCTCCTTGC CGCTTACACC AGTGGCACCG CGGCGGTCGA AACGTGGGCG GATGTCGCTC GTTCGGCCGA CTTCCCGTCC GCGGGGGATC GCGCCTCCCG CCCGGTCTGA
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Protein sequence | MITGASQGFG RDIAAEVLAR GHTVIAIVRD SSRVVDLVAA NPGRVEVVEA DLAQQEGVDH AVMIARDREV GVLVNNAGRA ICGAAEEVSM SDLRAQLELN FFAAAALTRA VLPGMRAQGY GTVVQLSSQG GRLSFPGVGA YSASKFALEG WSEALAGEVA PLGIRVMLVE PSRFRTGFNT TRSLGFAEQS GVYASTVGRV AADLAGVDGR QEGDPVRAAR IIADIVASAE VPLRLPLGAE AVDRLLAAYT SGTAAVETWA DVARSADFPS AGDRASRPV
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