Gene Tpau_1180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1180 
Symbol 
ID9155320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp1206735 
End bp1207574 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content69% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003646150 
Protein GI296138907 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCACCG GCGCCTCGCA GGGATTCGGG CGCGATATCG CGGCAGAGGT GTTGGCGCGG 
GGGCACACCG TCATCGCCAT TGTGCGCGAC TCCTCGCGGG TCGTGGATCT TGTCGCCGCG
AACCCGGGCC GCGTGGAGGT GGTCGAGGCC GACCTGGCAC AGCAGGAGGG AGTCGATCAT
GCAGTGATGA TCGCGCGCGA CCGCGAGGTC GGCGTCCTGG TCAACAATGC CGGACGCGCG
ATCTGCGGTG CTGCTGAGGA GGTTTCGATG AGCGATCTCC GCGCTCAATT GGAGCTGAAC
TTCTTCGCCG CTGCCGCCCT CACCCGAGCG GTACTTCCGG GCATGCGGGC CCAGGGATAC
GGCACCGTCG TGCAGTTGAG CAGTCAGGGT GGAAGATTGT CGTTTCCCGG CGTCGGCGCA
TACTCGGCGA GCAAGTTCGC ACTTGAGGGA TGGAGCGAGG CGCTCGCAGG CGAGGTGGCG
CCGCTGGGGA TCCGGGTCAT GCTGGTCGAA CCGTCACGGT TCCGCACTGG CTTCAACACC
ACTCGGTCCC TGGGCTTCGC GGAGCAGTCC GGCGTGTACG CGAGCACCGT GGGACGGGTC
GCTGCCGATC TCGCGGGCGT CGACGGACGC CAGGAGGGCG ACCCGGTGCG GGCTGCGCGC
ATCATCGCCG ACATCGTTGC GTCGGCCGAG GTCCCGTTGC GACTACCTCT GGGGGCCGAG
GCCGTCGACC GCCTCCTTGC CGCTTACACC AGTGGCACCG CGGCGGTCGA AACGTGGGCG
GATGTCGCTC GTTCGGCCGA CTTCCCGTCC GCGGGGGATC GCGCCTCCCG CCCGGTCTGA
 
Protein sequence
MITGASQGFG RDIAAEVLAR GHTVIAIVRD SSRVVDLVAA NPGRVEVVEA DLAQQEGVDH 
AVMIARDREV GVLVNNAGRA ICGAAEEVSM SDLRAQLELN FFAAAALTRA VLPGMRAQGY
GTVVQLSSQG GRLSFPGVGA YSASKFALEG WSEALAGEVA PLGIRVMLVE PSRFRTGFNT
TRSLGFAEQS GVYASTVGRV AADLAGVDGR QEGDPVRAAR IIADIVASAE VPLRLPLGAE
AVDRLLAAYT SGTAAVETWA DVARSADFPS AGDRASRPV