| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1123 |
|---|
| Symbol | |
|---|
| ID | 9155263 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 1149188 |
|---|
| End bp | 1150378 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | UBA/THIF-type NAD/FAD binding protein |
|---|
| Protein accession | YP_003646094 |
|---|
| Protein GI | 296138851 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.632622 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTACGT TGCCACCGCT CGTCGAACCC GCCGCCGAAC TGACCCGTGA CGAAGTCGCG
CGTTATTCGC GGCACCTGAT CATCCCCGAG ATGGGCGTCG AGGGGCAGAA GCGTCTCAAG
AACGCCAAGG TCTTGGTGAT CGGTGCCGGC GGTCTCGGCA GCCCCGCGCT GCTGTACCTC
GCCGCGGCGG GTATCGGAAC CATCGGGATC GTCGAGTTCG ACGAGGTGGA CGCGTCCAAC
CTGCAGCGCC AGGTGATCCA CGGCGTCTCC GACCTGGGCC GGCCCAAGGC CGAGAGCGCG
CGCGACTCCA TCGCCGAGAT CAACCCGCTG GTCACGGTGA ACCTGCATCA GGAACGGCTC
GAACCCGAGA ACGCGGTGCA GCTCTTCGAG CAGTACGACC TGATTGTCGA CGGCACCGAC
AACTTCGCCA CCCGCTACCT GGTCAACGAC GCAGCGGTGC TGGCGCACAA GCCCTACGTC
TGGGGCTCGA TCTTCCGGTT CGAGGGGCAG GCGTCGGTGT TCTGGGAGGA TGCGCCCGAC
GGTCCGAACG GTGAGAAGCA GGGCCTGAAC TACCGCGACC TGTACCCGGT GGCGCCACCG
CCCGGCATGG TTCCCTCGTG CGCCGAGGGC GGCGTGCTCG GCATCCTGTG CGCCTCGATC
GGGGCGATCA TGGGCACCGA GGCGGTCAAG CTGATCACCG GTATCGGCGA CTCGCTGCTC
GGCCGGCTCA TGGTCTATGA CGCCCTCGAC ATGACCTACC GCACCATCAA GATCCGCAAG
GACCCCGCTT CACCGGCGAT CACCGAGCTG ATCGATTACG AGGAGTTCTG CGGGGTGGTC
TCGGACGAGG CTCAGGCCGC TGCCGCGGGG AGCACCATCA CCCCGGCCGA GTTGGTCGAG
CTGGGCGAGC AGGGCGTGGA GTACGAGCTG ATCGACGTGC GTGAGCCTGT CGAATGGGAC
ATCGTGCATA TCGACGGTGC GAAGCTGGTA CCGAAGTCGG TCTTCGAGAC CGGTGAGGGC
CTGGAGCGGG TCTCGGCCGA CAAAAAGCTG GTGCTCTACT GCAAGACCGG TATCCGCTCC
GCCGAGGTGC TCGCAGCGGT GCAGGGCGCC GGGTACCGCG ACGCGGTACA TCTGCAGGGC
GGAATCAACG CCTATGCCCG GCAGGTGGAT CCGTCACTAC CGGTGTACTG A
|
|---|
| Protein sequence | MSTLPPLVEP AAELTRDEVA RYSRHLIIPE MGVEGQKRLK NAKVLVIGAG GLGSPALLYL
AAAGIGTIGI VEFDEVDASN LQRQVIHGVS DLGRPKAESA RDSIAEINPL VTVNLHQERL
EPENAVQLFE QYDLIVDGTD NFATRYLVND AAVLAHKPYV WGSIFRFEGQ ASVFWEDAPD
GPNGEKQGLN YRDLYPVAPP PGMVPSCAEG GVLGILCASI GAIMGTEAVK LITGIGDSLL
GRLMVYDALD MTYRTIKIRK DPASPAITEL IDYEEFCGVV SDEAQAAAAG STITPAELVE
LGEQGVEYEL IDVREPVEWD IVHIDGAKLV PKSVFETGEG LERVSADKKL VLYCKTGIRS
AEVLAAVQGA GYRDAVHLQG GINAYARQVD PSLPVY
|
|---|
| |