Gene Tpau_0959 details

Gene Information

• Locus tag: Tpau_0959
• ID: 9155099
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 983295
• End bp: 984065
• Gene Length: 771 bp
• Protein Length: 256 aa
• Translation table: 11
• GC content: 65%
• Product: ABC-2 type transporter
• Protein accession: YP_003645931
• Protein GI: 296138688

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.00197586
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCACCC ACGCAGTCTC CGATACCCAT GCCCTGCTGG GACGCTCGCT CAAACACATC 
ACCCGGAGCG CGGACACCAT CATCACCACC GCGCTCACCC CGATCGCGAT GATGCTGCTG 
TTCGTGTACG TGTTCGGCGG AGCGATCAAG ACCAGCACGG GCGAGGCCAA CTACGTCAAT 
TACCTGCTGC CCGGCATCCT GCTCATGGCC ATCGCCTCGG GTATCGCCTA CACCGCACTG 
CGCATGTTCA ACGATATGCA CGGCGGCATC TTTGAACGCT TCCAGTCGAT GCCGATCGCC 
CGCTCGTCGG TGCTGTGGGC GCACGTGCTC ACATCGATGG TGGCCAACGC CATCACGGTG 
GCGATCATCA TCGGCGTCGC CCTGCTCATG GGCTTCCGTT CGTCCGCCGG TCCGCTGGCA 
TGGCTCGGGG TGTTCGGCAT CCTCGCGCTG TTCACGCTGG CGCTCACCTG GATCGCGGTG 
ATCGCCGGTC TGTCGGCGAA GACCGTCGAC GGGGCCAGCG GCTTCTCCTA CCCGCTGATC 
TTCCTGCCCT TCATCAGCTC CGCGTTCGTG CCGACCGACA CGATGCCCGG CCCGGTGCGC 
GCCTTCGCCG AGAACCAGCC GGTCACTTCG ATCGTGAACA CGATCTCCGC GCTGCTCGCC 
GAACGGCCGG TGGTGACCTC CGATCTGGTA TCGGCTCTGG CCTGGTGCAC CGGCATCCTG 
GTGCTGGCCT ACGCCGCCGC CATGCTGGTC TACCGCCGCA AGATCAGCTG A 

 

Protein sequence

MTTHAVSDTH ALLGRSLKHI TRSADTIITT ALTPIAMMLL FVYVFGGAIK TSTGEANYVN 
YLLPGILLMA IASGIAYTAL RMFNDMHGGI FERFQSMPIA RSSVLWAHVL TSMVANAITV 
AIIIGVALLM GFRSSAGPLA WLGVFGILAL FTLALTWIAV IAGLSAKTVD GASGFSYPLI 
FLPFISSAFV PTDTMPGPVR AFAENQPVTS IVNTISALLA ERPVVTSDLV SALAWCTGIL 
VLAYAAAMLV YRRKIS