Gene Tpau_0939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0939 
Symbol 
ID9155079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp964719 
End bp965183 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content70% 
IMG OID 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_003645911 
Protein GI296138668 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.270969 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTCCGCA TTCTGTTTTT CGAGCCGCGA ATCGCTCCCA ACACCGGGAA CGCGATCCGG 
CTTGCGGCGG TCACCGGGTG CGAACTGCAC CTGGTGGAGC CGCTCGGTTT CGACCTCTCG
GAACCGAAGC TGCGCCGGGC CGGCCTCGAC TACCACGATC TAGCCCACGT GCGCGTGCAC
GCCGACCTCG AGGCCGCCTG GTCTGCCCTG CGTCCCGAGC GGGTGTTCGC CTTCACGGCG
CACGCGCGGC GCTACCACCA CGAGATCGCC TATTCCGCCG GCGATGTCCT GATGTTCGGC
CCTGAGCCGA CGGGACTGCC GCCCGAGGCG CTGGGCGATC CGCACGTCAC CGAGTCCGTG
CGGATCCCCA TGCTCGCGTC GCGCCGCTCG CTGAACCTGT CGAACGCCGC CGCCGTGGTC
GCCTACGAGG CATGGCGCCA GCAGGGTTTC GACGGCGGCG TCTGA
 
Protein sequence
MFRILFFEPR IAPNTGNAIR LAAVTGCELH LVEPLGFDLS EPKLRRAGLD YHDLAHVRVH 
ADLEAAWSAL RPERVFAFTA HARRYHHEIA YSAGDVLMFG PEPTGLPPEA LGDPHVTESV
RIPMLASRRS LNLSNAAAVV AYEAWRQQGF DGGV