| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0770 |
|---|
| Symbol | |
|---|
| ID | 9154910 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 784605 |
|---|
| End bp | 787850 |
|---|
| Gene Length | 3246 bp |
|---|
| Protein Length | 1081 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | SNF2-related protein |
|---|
| Protein accession | YP_003645745 |
|---|
| Protein GI | 296138502 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCAT CGACTACCAG TGGCGGCCCC TCGTTCACGC CCGAGGACCT GACCGGATTC
TTCGGCGCAC CGACGGTGCG GCGGGCCGGC GAGTACGTGG GCACCGGCCT CATCGGCGAC
TTGGAGTGGG ACGACGAGAA GCGGCTGGTG ACCGGTGTCG TCGCCGGGAC GCGCGAGTAC
GACGCCCGGG TGTGGATCGA ACCCTCCGGC GGCGGCTGGC GCCCCGTCCG GAGCCTGTGC
ACCTGTCCGG TGGCACTCAA CTGCAAGCAC GGCGCCGCAC TGTTGCTCGA ACTGACCGCG
GAAGACGTCG AAGAGTCCGC CGTCGAGCAG CCCGATCCGT GGGAGCGACA GCTCGAGGCA
TTGCTACCCG ACAAGCCACG CAGCGTGGCG ACGGTACCGG TGGCATTGCA GTTCGACGTC
GATGAGCGCG GCGTGACCAC CGGGCAGCGG CTTCAGGTGC GCCTGGCCAC GCCCGGGATG
CGCGACGGCA GCTGGGTCGC CGGCGATGTC CGCTGGCGCA CCATCTCGTC CGCACCGCGC
GTGGCGCCCG CGCAACGTGA GGTACTGACC CCGCTGGCCC AGTTGGTGCT GTGGAACCTG
TACGGCGTGG ATGCCTGGGC CGATCTCGGA ATGATCGACA CCCCCTTGCT GTGGGACCAA
CTCCGCGCCG TCCGCGATGC CGGGGTCCCG CTGCTGACCA AACGTCCGCG CGGCACGGTG
ATGCTGGCGC CCCCTACCCG GCTGGGCCTG GTGGCGCGCC CCGAGACGGG CGGAGTGGAA
CTCGATCGCG AGATCGACTT CGGCGACGGT CCGCGACGGT TCACCGGCGG CCTGCTGGGT
GCACATCGTG CGCTCGGCGT GTTCCAACAG GACGGTGACG AGTTGCGTAT CGCGCCACTC
GATCCCCCGC TCTCGCCGGC CCACACCACG GCGCTGCGCC GGTTCACGCC GGTCCGGGTG
CCCGCAGAAG CCGTCCCCCA GCTCCGGGAG AAGTACCTGC CGTATCTCAC CGCGGTGGCG
CCGGTACGCG ATCCGGAGCG GCTGGTCGGC GAGATCGAGG TCCTCGGACC CGAGTTGGTG
TGCACCGCAC GGTATTACCC CGAGGCCGGC GAACTCGAGG TGGACTGGAA ATGGCGGTAC
AGCGTGGGCG GCGAGGCCCG CGATTACGCC GTGGGCTCCG AACCGGCCGG TATCGCGGAT
TCCATGGGGC AGCAGCGGAT CACTCGCGCG ATGGCAGGTG CGCTGCGTGA GGCGCAGGTC
ACCGTCGACC ACTCCCAGGG CTTCTACCGC GGCACCGAGG CCGCGGTGTG GCTGGCCGAA
GCGGCACCGG TGCTGCGGAC CGTGCCCGGG GTGATCGTGG AAGTCACCGA CGATCCCGGG
TTCCGTTGGT CGGAATCGGC TGCGACCGTG TCGGTCCGGG TGCGCGGCGA GGACTCCGAA
TCGCCGTCGA TGGACTGGTT CGACCTTGAG GTGGCCGTGG AGGTGGACGG CGAGGAGGTG
CCCTTCCGTG ATGTCTTCAC CGCGGTGGCG GGCGGCCTCG ATACCATCGT CACCCCGGGC
GGGGTGCTCG CCCGGATCGA CGGTGAGCGG TTCGACCGGC TACGCGAGCT GATCGGAGAG
GCCCGCGAGC TGCCGGCCCG CGGCGCCCGA CGCGGCGCCC GCGGCACCGG CGCAGATGAG
CGGGATGGAT TGCGGATCAG CAGATTCCAG GCGGGACTGG TCGACGACCT CGCTGATCTC
GCGGACTCCA CCGACTTCGA CGGCGATTGG AGCCGCCGGG TAGGGGCGCT CACCGCCGGC
GACCTGGCGC GACAGGAGAC CCCGTCCACC CTGCGCGCCG AGCTGCGGCC GTACCAGCGC
GACGGCCTGG ATTGGCTCTC CTTCCTGTGG GACAACGATT TCGGCGGAAT CCTTGCCGAC
GACATGGGCC TGGGAAAGAC CGTGCAGACG CTGGCGCTGA TCTGCCGCGC GCACGAGAAC
GCCGAACCGG ACGTACTGGG CTCACCAGGT CCGTTCCTGG TGGTGGCTCC GACTTCCGTG
GTGGGCAACT GGGCGGCGGA GTGCCGCCGG TTCGCGCCGC ACCTGACGGT GGCCGCGGTC
GCCGAGACTT CCCGCAAGTC GGGCGCCTCG ATCAGTTCCG TGGTGGCGGG CGCCGACGTG
GTGCTCACCT CGTACACTCT GCTCCGCCTC GACGCCGAGG AGTACGCGGC GGTGCGATGG
GCGGGCGTCA TCCTGGACGA GGCGCAGTTC GTGAAGAACC CGCGCTCGAA GGCTTTCGCG
GCGGTGTCGC TGCTGGATCG GCGGTTTACG CTGGCCGTGA CCGGTACGCC GATGGAGAAT
CATCTGGAAG AACTGTGGGC GCTCACCGCG CTCACCGTGC CCGGGCTGTT CCCGGGCCGC
ACCTGGTTCG CGGAGGAGTA TCGCCGCCCC ATCGAGCGTG GTGGCGACGA TGACCGACTG
GCCCGGCTAC GCCGACGGGT GCGGCCGTTC ATGTTGCGGC GCACCAAGGA TCTGGTGGCC
AAGGACCTGC CGGAGAAGAC CGAATCCGTG GTACAGGTAC AGCTCAGCGA CGAACACCGG
CACACCTACG ACCGCATCCT GGCCGACCAG CGCGCCAAGC TGCTGGGCCT ACTCGATGAC
TTCGACGGCA ACCGGTTCGA GATCCTGCGC TCGCTGACCA TGCTGCGGCG CCTCGCGCTC
GACCCGTCGC TGGTCGACGA GGAACTGGCC GTCGAAGACG TCGCCAAGCT CGACTACCTC
GCGGAGAAGC TCGATGAGCT GCTGGAGGAG AAACATGCGG TGCTGGTGTT CAGCCAGTTC
ACCGGGTTCC TACGCAAGGC CGCAGAGCGG CTCGATGAAG AGGGCGTGGA GTACGCCTAC
CTGGACGGGT CCACGACCGA CCGGGCTGCG GCGATCGAGA AGTTCACCTC GGGCGAGGTG
CAGGTGTTCC TGATCTCGCT CAAGGCCGGT GGTTTCGGCC TGAACCTGGT GCAGGCCGAC
TACTGCTTCC TCCTGGATCC GTGGTGGAAT CCCGCGGCCG AGGCACAGGC GATCGACCGC
GCGCACCGCA TCGGACAGAC CCGCAGCGTG ATGGTTTACC GCCTGGTTTC CGCGGGCACC
ATCGAGGACA AGGTGATGGA GCTCAAGGAG CGCAAAGCCG CGCTCTTCGA GTCCGTGGTG
GGCGGCGAGG GTGGATTCGA CGCCAGGCTG GCGGCCTCCG ATATCCGCGC ACTGTTCGAG
GACTGA
|
|---|
| Protein sequence | MSASTTSGGP SFTPEDLTGF FGAPTVRRAG EYVGTGLIGD LEWDDEKRLV TGVVAGTREY
DARVWIEPSG GGWRPVRSLC TCPVALNCKH GAALLLELTA EDVEESAVEQ PDPWERQLEA
LLPDKPRSVA TVPVALQFDV DERGVTTGQR LQVRLATPGM RDGSWVAGDV RWRTISSAPR
VAPAQREVLT PLAQLVLWNL YGVDAWADLG MIDTPLLWDQ LRAVRDAGVP LLTKRPRGTV
MLAPPTRLGL VARPETGGVE LDREIDFGDG PRRFTGGLLG AHRALGVFQQ DGDELRIAPL
DPPLSPAHTT ALRRFTPVRV PAEAVPQLRE KYLPYLTAVA PVRDPERLVG EIEVLGPELV
CTARYYPEAG ELEVDWKWRY SVGGEARDYA VGSEPAGIAD SMGQQRITRA MAGALREAQV
TVDHSQGFYR GTEAAVWLAE AAPVLRTVPG VIVEVTDDPG FRWSESAATV SVRVRGEDSE
SPSMDWFDLE VAVEVDGEEV PFRDVFTAVA GGLDTIVTPG GVLARIDGER FDRLRELIGE
ARELPARGAR RGARGTGADE RDGLRISRFQ AGLVDDLADL ADSTDFDGDW SRRVGALTAG
DLARQETPST LRAELRPYQR DGLDWLSFLW DNDFGGILAD DMGLGKTVQT LALICRAHEN
AEPDVLGSPG PFLVVAPTSV VGNWAAECRR FAPHLTVAAV AETSRKSGAS ISSVVAGADV
VLTSYTLLRL DAEEYAAVRW AGVILDEAQF VKNPRSKAFA AVSLLDRRFT LAVTGTPMEN
HLEELWALTA LTVPGLFPGR TWFAEEYRRP IERGGDDDRL ARLRRRVRPF MLRRTKDLVA
KDLPEKTESV VQVQLSDEHR HTYDRILADQ RAKLLGLLDD FDGNRFEILR SLTMLRRLAL
DPSLVDEELA VEDVAKLDYL AEKLDELLEE KHAVLVFSQF TGFLRKAAER LDEEGVEYAY
LDGSTTDRAA AIEKFTSGEV QVFLISLKAG GFGLNLVQAD YCFLLDPWWN PAAEAQAIDR
AHRIGQTRSV MVYRLVSAGT IEDKVMELKE RKAALFESVV GGEGGFDARL AASDIRALFE
D
|
|---|
| |