| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0760 |
|---|
| Symbol | |
|---|
| ID | 9154900 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 777482 |
|---|
| End bp | 778789 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | Mandelate racemase/muconate lactonizing protein |
|---|
| Protein accession | YP_003645736 |
|---|
| Protein GI | 296138493 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCGA AGTTCACCGG ATTTCGGACG CTGGACGTGC GATTCCCCAC CTCCAAGGAG
CTCGACGGAT CCGATGCGAT GAACGTCGAC CCCGACTACT CTGCGGCATA CCTGGTGCTC
GAGACCGACG CCGCTGATGG TCTGGAGGGG CACGGCTTCG TGTTCACCAT AGGCCGCGGT
AACGACGTGC AGCGCGCCGC GATCGAGGCC CTGTCGGGGT ACGTCCTCGG CCGCGATGTG
GACGCCGTCC TGGATGATCT CGGCGGAATG TGGCGCGAAC TGGTCTACGA CGCACAACTG
CGCTGGCTCG GTCCCGAGAA GGGCGTCATG CACATGGCGA TCGGTGCAGT CGTGAACGCC
CTGTGGGATC TCCGGGCCAA GCGTGAAGGA ATGCCGCTGT GGCAGTTGCT CGGTGGACTC
AGCCCGGAGC AGATCGTCGA TCTGGTCGAT TTCCGGTACC TCACGGACGC GCTCACCCCG
GACGAGGCGC TGGAGTTGCT CCGTGCCGCG GAACCTGGGC GTGCGCAGCG GTCGGCCGCG
TTGCAGGAGC ATGGCTATCC CGGATACACC ACCTCGCCGG GCTGGCTCGG ATACTCCGAC
GAGAAGCTGG AGCATCTCGC GAAAGAGGCG GTGGCACAGG GCTTCACCCA GATCAAGCTC
AAGGTGGGCG CCGATATCGA CGACGATATC CGCCGCTTCG CTCTGGCGCG GTCCGTGGTG
GGCGACGGTA TCCGGATCGC GGTCGATGCG AACCAGCGTT GGGACGTTCG CGAGGCGGTC
GACGCGATCG AGCGGCTGGC CCCTTTCGAT CCGTGGTGGG TGGAGGAACC CACGGCGCCG
GATGATGTGC TCGCGCACTC CGCGATCCGG CGACGGGTCT CACCCGTGCG GATCGCCACC
GGCGAGCATG CGCACAGCCG GGTGCTGGTC AAGCAGTTGC TGCAGGCTGA GGCGATCGAT
GTGCTTCAGC TCGATTCCAC CCGTGTGGCC GGGGTCAACG AGAACATCGC GATCCTGCTG
CTGGCCGCCA AATTCGGCAT TCCGGTGTGC CCGCACGCGG GTGGCGTGGG GCTGTGCGAA
CTGGTGCAGC ACCTCGCGAT GTTCGACTAC GTCGCGGTTT CCGGCACTCT CGCCGACCGG
AACATCGAGT ACGTCGACCA TCTGCATGAG CACTTCCTGG ACCCGGTGCG GATCGTCGAC
GGGGCGTACG CCGCGCCGTC GGCGCCGGGC TTCTCGGCCC AGATGCACGC GAAGTCCCTC
ACGCGGTACG GCTTCCCCGA CGGAGAAGCC TGGAAGGAGG CACCATGA
|
|---|
| Protein sequence | MSAKFTGFRT LDVRFPTSKE LDGSDAMNVD PDYSAAYLVL ETDAADGLEG HGFVFTIGRG
NDVQRAAIEA LSGYVLGRDV DAVLDDLGGM WRELVYDAQL RWLGPEKGVM HMAIGAVVNA
LWDLRAKREG MPLWQLLGGL SPEQIVDLVD FRYLTDALTP DEALELLRAA EPGRAQRSAA
LQEHGYPGYT TSPGWLGYSD EKLEHLAKEA VAQGFTQIKL KVGADIDDDI RRFALARSVV
GDGIRIAVDA NQRWDVREAV DAIERLAPFD PWWVEEPTAP DDVLAHSAIR RRVSPVRIAT
GEHAHSRVLV KQLLQAEAID VLQLDSTRVA GVNENIAILL LAAKFGIPVC PHAGGVGLCE
LVQHLAMFDY VAVSGTLADR NIEYVDHLHE HFLDPVRIVD GAYAAPSAPG FSAQMHAKSL
TRYGFPDGEA WKEAP
|
|---|
| |