Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_0642 |
Symbol | |
ID | 9154778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 660295 |
End bp | 661563 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003645618 |
Protein GI | 296138375 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATTTCA CACATCGCGA GTCGCGGCGC ACTCTCGTCA GCGTGACCGC CACCGCTGCC TCCGCCACCG TCGCCCCGCT CCGCGCGGGA ACGCCCGCGT ACCGCCGCAT CACCCTGGCG TTGTTCGTGG CCGGGCTCAC CACCTTCGGG TCGATGTACT CGACTCAGGC GGTGCTGCCC GAGCTCACCC GCGTGTTCGG CGCCGCGCCC GCCACGTCGG CGCTCGCCGT CTCGGTGACC ACCGGCCTGC TCGCGCTCAC GATCATCCCC GTCAGCGCGC TATCCGAGCG ATTCGGGCGC ACCCACGTGA TGACCGCGTC CGCGATACTG GCCGTGGTGC TGGGGCTGCT GATCCCGCTC TCGCCCACAC TGCCGGTGCT GCTGGCGCTG CGAGCGCTGC AAGGAATCGC CCTGGCCGGA GTGCCCGCCG TCGCCATGGC CTACCTCGCC GAGGAGGTCG CCGGCCGCGA CCTCGGCGGA GCGATGGGGC GGTACGTCGC GGGTACCACC ATCGGTGGAC TGCTCGGTCG TGTGGTGACC GCCGTGGGGC TCGATGTGCT GCCCTGGCGC GGCGCCATGG AGGTGTTCGC GGTGCTCGCC GCCGTGCTCA CCGCCGTGAT GATCCGGACG CTCCCGGCAT CGCGATTCCA TTCCCCCAAG CCGGTTTCCG TGTCGACGAC GGTACGCGGC ATGGCCGGAC ACGTTCGCCG CCCCGCCCTC GCGGTCCTGT TCATCCTCGC CTTCCTGCTG ATGGGCGGCT TCGTCAGCGT CTACAACTTT CTCGGCTTCC GGTTGCTGGA CGCGCCGTTC GGCTTCTCGG CAGGAGTGGT GGGCCTGGTC TTCCTGATCT ACCTCGCCGG CACGTGGTCG TCCGGGGCGG CGGGACGGCT CGCGGACCGC GTCGGCCGCC GGCGCGTGCT GCTCGCGTCG ATCACCGCCA TGGGGGCGGG CTTGTTGATC ACGCTCCCCG ACACGATTCC GACGGTATTG ATCGGCACCG TCGTGCTCAC GGCGGGCTTC TTCGCCGCGC ACAGTGTGGC CAGCGGATGG GTCGGCGCGC TCGCCACCGA ACACCGCGCC GAGGCCTCGT CGGGCTACCT GTTCTGCTAC TACGCCGGAT CGTCGGTGCT CGGCGCCGCC GCCGGTATCG CCTTCAGCGC CGCCGGGTGG ACGGGCATCG TGCTGGCGGT AGGGGTCGCG GTGGTCGTCG CCGGTGTGCT CGCGGCCGCC GTGCTCCCCG GTTCGCCGGG CGAAGCCGCG GGCGACTGA
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Protein sequence | MHFTHRESRR TLVSVTATAA SATVAPLRAG TPAYRRITLA LFVAGLTTFG SMYSTQAVLP ELTRVFGAAP ATSALAVSVT TGLLALTIIP VSALSERFGR THVMTASAIL AVVLGLLIPL SPTLPVLLAL RALQGIALAG VPAVAMAYLA EEVAGRDLGG AMGRYVAGTT IGGLLGRVVT AVGLDVLPWR GAMEVFAVLA AVLTAVMIRT LPASRFHSPK PVSVSTTVRG MAGHVRRPAL AVLFILAFLL MGGFVSVYNF LGFRLLDAPF GFSAGVVGLV FLIYLAGTWS SGAAGRLADR VGRRRVLLAS ITAMGAGLLI TLPDTIPTVL IGTVVLTAGF FAAHSVASGW VGALATEHRA EASSGYLFCY YAGSSVLGAA AGIAFSAAGW TGIVLAVGVA VVVAGVLAAA VLPGSPGEAA GD
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