Gene Tpau_0602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0602 
Symbol 
ID9154738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp625302 
End bp625964 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content72% 
IMG OID 
Product2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 
Protein accessionYP_003645579 
Protein GI296138336 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.501515 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTGACCGTCG TCGCGCTGGT CCCCGCCGCT GGGCAGGGGA CGCGCTTGGG CCTCAATCGG 
CCCAAGGCCT TCGTGACTCT GCAGGGCCGT TCACTGCTCG AAAGGGCGGT GGACGGCCTG 
TTCGCGTCCG GGGCGGTCGA CGAGGTGGTC GTCATGGTGC CCGCCGACCT GGTCGATGAT 
GCCCGCGCCC TCGTCCCGCG TGCCCGCGTC GTCGTGGGTG GGGCTGAACG CACGGACTCC 
GTGCGGGCCG GCCTCGCCGC CGCGGGCGAC GCCGATCTGG TGCTGGTGCA TGACGCCGCC 
CGACCGTTGA CGCCGGGACC GATGATCCAC CGAGTGGTCG CAGCCCTGCG GGAGGGGGCG 
AGCGCGGTCA TTCCCGTGCT GCCCGTCGCC GACACCATCA AACGCGTGGA TGCCGGCGGT 
GCCGTCGCCG CTACCGTCGA CCGGGCCGAC CTGCGGGCCG TGCAGACGCC CCAGGGATTC 
ACCGCGCAGG CTCTGCGCGC CGCCTACGAT GCGGCGCCCA ACGAGTCGGC CACGGACGAT 
GCGGGTCTGG TCGAGCGGGC CGGCGGCACC GTCGCTACCG TGACCGGCGA CCCGCTCGCG 
ATGAAGATCA CCACCGCCTT CGATCTGCGG ATCGCGGAAG TTCTTGCGCA GGAGCACAAA 
TGA
 
Protein sequence
MTVVALVPAA GQGTRLGLNR PKAFVTLQGR SLLERAVDGL FASGAVDEVV VMVPADLVDD 
ARALVPRARV VVGGAERTDS VRAGLAAAGD ADLVLVHDAA RPLTPGPMIH RVVAALREGA 
SAVIPVLPVA DTIKRVDAGG AVAATVDRAD LRAVQTPQGF TAQALRAAYD AAPNESATDD 
AGLVERAGGT VATVTGDPLA MKITTAFDLR IAEVLAQEHK