Gene Tpau_0590 details

Gene Information

• Locus tag: Tpau_0590
• ID: 9154726
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 615474
• End bp: 616043
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 69%
• Product: transcriptional regulator, TetR family
• Protein accession: YP_003645567
• Protein GI: 296138324

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGCCCG CGCCTAGGCA GCAGCGTGAT GCCGCTGCCA CCAAGGCCCG CCTGCTCGAC 
GCTGCGACCG CCGAGTTCGC CGAATACGGA CTCGCGGGCG CCCGCGTCGA CCGGATCGCC 
ACTGCGGCCG AGGCGAACAA GCAGTTGATC TACGCCTACT TCGGCAATAA GCGCCAGCTC 
TTCGACGCAG TGATCGAGTT CCGCGTGGCC GATCTGTTGG AGACCGTGCC GTTCACCGCC 
GATGACCTCT CGGGCTACGC CGTGCGGTTA CGTGCCTTCA ATCGAGCACA CCCGGAACTG 
ATGCGCCTGG TGCTGTGGCA CACGCTCGAG TGTCCCGGTG AGCTCGCGGA ACTGGAGCTG 
GCGTCCGGGT CGAACGCGAA GAAGATCGCG GCGCTGCAGG CGGCGCAGGA CGCCGGAACC 
GTCACCGCGG GCACCCCGGC GCCCACGCTG CTCATCGAGA TCCTGGCGCT GATCCACGGC 
GATATCCTCA CCGCCGGAGG CGATGTGGCC GCCCTCGCGC TCGACGACGC GGCCCTTGCC 
GCGGCCGTCG AGAAGCTCAC GGCACCCTGA 

 

Protein sequence

MPPAPRQQRD AAATKARLLD AATAEFAEYG LAGARVDRIA TAAEANKQLI YAYFGNKRQL 
FDAVIEFRVA DLLETVPFTA DDLSGYAVRL RAFNRAHPEL MRLVLWHTLE CPGELAELEL 
ASGSNAKKIA ALQAAQDAGT VTAGTPAPTL LIEILALIHG DILTAGGDVA ALALDDAALA 
AAVEKLTAP