| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0397 |
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| Symbol | |
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| ID | 9154532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 414625 |
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| End bp | 417195 |
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| Gene Length | 2571 bp |
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| Protein Length | 856 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003645377 |
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| Protein GI | 296138134 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0721103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCTCAC CCATGCGCAA GGTGGCCTTG CGCAATCTGA TGGCGCACAA GGGCCGGCTG
TTCCTGACGG TCCTCTCGGT GCTCCTCGGC ACCTCGTTCA TCGCCGGATC GATGGTCTTC
ACCGGAACGC TGTCGAAGGC TTTCGACGGG ATCTCGGACC GGATCGCGGT GGGGGTCGAC
GCGCGAGTCG CGCCGAAGGA TGCGCAGGGG CAGGGCGGTT TCGGGCCACA GGGACCCGGT
GTCCCGCTCA GCGCGCTCGA CCGGGTCCGC GCCGTGCCGG GTGTGCGGAT CGCGCAGCCC
GCCGTCACCG GTTCCATCGC GCTCCGCGAC GGCAAGGGCG ATGTGGTCTC GCCCACCGGC
GCGCCGCAGA CCGGCGGTGC CTACCTGCCG CCGGGGGAGA GCTTCGAGTC CGATGGCCTG
AAGATCACCG AGGGCCGCGC ACCGTCGGGC CCGAACGAGA TGGTGCTCAA CGACTCCGCG
GCCGACCGGC TCGATCTACC GGTGGGGTCC AAGACCACCG TGGTGACGCC GCGGTCGCCG
GGGCCGATCG AGGCGACCAT CGTCGGCACG TACACCGCGT CGGTCGACAC GGGCGGGTAC
ATCGGCGCCC TGTTCGCGAA GGACGAGGCG CAGAAGCTGT TCGGCGACGG CGCGACCACA
CCGAACATCG ACGTGGCCGC GGCGCCGGGA ACCAGCCCCG AGCAACTGCG CGACCGTCTC
GCGCAGGCGC TACCCGAACT CGACGTCAAG ACCGGTGACG AGGTGCGCAC CGAGTTCACC
GACCAGGTGA ACCAGGGGCT CAGCTTCCTC AATTACTTCC TCGTCGCCTT CGGTCTGATC
GGTTTGCTGG TAGGCGTTTT CATCATCTAC AACACGTTCT CGATGCTCGT CGCACAGCGC
CTCAAGGAGC TCGCGCTGCT GCGCGCGATC GGCGCCAGCC GTCCACAGGT ACGCAACTCC
GTGGTGCTCG AGGCGCTCGT CGTCGGCGTG CTCGGCAGTG CTGCCGGACT CGCGACCGGC
ATCGGTCTGG CCTGGCTGTT GCAGGCCGTG GTGAAGGCCG CGGGTGCGGG CTTCCCCGAT
ACGGGCATCG TGGTCGCGCC CTCGGTCGCG ATCACCGTGA TGCTCGTGGG CACCGTGGTC
ACGGTGATCT CCGCGTTGAT TCCCGCGGTC CGGGCGTCGA AAGTCCCACC CGTGGCAGCG
ATGCGAGCGC AGGACGGCGG ATCCGCCGCA TCGGTCCTGG TGCGCGGCGC GATCGGTGCG
GCCCTTTTCC TCAGTGCGCT CGCGCTGCTG TTCGTGGCGA CCACCGAGTC CGGTTCCGGT
GCAGCGATCA TGGTGGGCGT CGCCGGCTTC GGACTGGTGC TCGCCGTGGT GATCGGCGGC
CCGGCTCTCG TCGGCCCCGT GCTCGGCGGC GTCGGCACGG TGCTCGCCAA ACCCTTCGGC
CCGGCCGGCC GATTGGGCCG TACCAACGTG ATGCGTAATC CTCAGCGCAC CACCGCGACC
GCGTTCGCCC TGGTGATCGG CGTGGCGCTG GTGGGTGTGA TCGGCACCCT GGGGGCGTCC
ATGCAGAAGT CGATCGACTC GCAGGTCGAC ACGGGTATCA GGTCCGATCT GGTGCTGCAG
GCGCCGCAGT TCGGGATGCC GCCCGCGGCG CTCACCGCGA TCAAGGACGT CCCCGGCATC
GGCACCAAGA CAACGCTGTA CGCGGTGCCC ACGCGGATCG ACGGTGACCG GCAGAACCTG
CTCGCCGTCG ACGGCGATGT GAACGCGGTG TTCAATCTGA CCCGGGTCGC CGGCACGCTG
GACCTGAAAT CCGGTGGCCT CCTGATCGAC GAGGACAAGG CGCGGGCAGA GGGCTGGGAG
GTCGGCTCGA AGGTCGCCCT GGGCTCGGCC ACCGGCCGGG AGCAGGCCGA GACGACGGTC
ACCGGGATCT ATGCCAAAGC CGGTGGCCTG TCCGGGCCGG TGGTCACCGT CGGTGAGGTG
AACACGCTGT ATCCGCCCGC GCAGGGGGCG ACCAGCCCGA TCGTCACGCC GCAATCGGTC
TTCATCGGCG CCGCCGACGG CACCTCCGTC GAGGACCTCA AGGACCGGCT GCGCGAGGCG
GTCAAACCGT TGCTGGTGGT CAATGTCGAC GATCAGCAAG ACCTCAAGGA CCAAGCAGGC
CAGGCGATCA CCGCCCTGAT GGGCGTGCTC TACGGGCTGC TCGGCTTGGC GGTGATCATC
GCGATCCTGG GCATCATCAA CACACTGGCG CTGTCGGTGG TGGAGCGGCG CCGCGAGATC
GGCATGCTCC GCGCGATCGG CATGATCCGC TCCCAGGTGC GCAAGTCGAT CTATCTCGAA
TCGATGCTGA TCGCGCTGTT CGGCGCCGTA CTCGGCCTGG TGCTCGGCGT GCTACTGGGC
ACGTCGCTGG TGTACGCGCT GCGTGATGAG GGGCTCGGCT CCGTGGTCGT CCCGTGGTCG
ACGGTGTTGG TGATGCTGGT CGCCTCGGCC TTCGTCGGCG TGGGTGCGGC GATCCTTCCG
GCCATCCGTG CCTCCCGCAC GCCGCCACTC GCCGCGATCG CGGAGGGCTA G
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| Protein sequence | MASPMRKVAL RNLMAHKGRL FLTVLSVLLG TSFIAGSMVF TGTLSKAFDG ISDRIAVGVD
ARVAPKDAQG QGGFGPQGPG VPLSALDRVR AVPGVRIAQP AVTGSIALRD GKGDVVSPTG
APQTGGAYLP PGESFESDGL KITEGRAPSG PNEMVLNDSA ADRLDLPVGS KTTVVTPRSP
GPIEATIVGT YTASVDTGGY IGALFAKDEA QKLFGDGATT PNIDVAAAPG TSPEQLRDRL
AQALPELDVK TGDEVRTEFT DQVNQGLSFL NYFLVAFGLI GLLVGVFIIY NTFSMLVAQR
LKELALLRAI GASRPQVRNS VVLEALVVGV LGSAAGLATG IGLAWLLQAV VKAAGAGFPD
TGIVVAPSVA ITVMLVGTVV TVISALIPAV RASKVPPVAA MRAQDGGSAA SVLVRGAIGA
ALFLSALALL FVATTESGSG AAIMVGVAGF GLVLAVVIGG PALVGPVLGG VGTVLAKPFG
PAGRLGRTNV MRNPQRTTAT AFALVIGVAL VGVIGTLGAS MQKSIDSQVD TGIRSDLVLQ
APQFGMPPAA LTAIKDVPGI GTKTTLYAVP TRIDGDRQNL LAVDGDVNAV FNLTRVAGTL
DLKSGGLLID EDKARAEGWE VGSKVALGSA TGREQAETTV TGIYAKAGGL SGPVVTVGEV
NTLYPPAQGA TSPIVTPQSV FIGAADGTSV EDLKDRLREA VKPLLVVNVD DQQDLKDQAG
QAITALMGVL YGLLGLAVII AILGIINTLA LSVVERRREI GMLRAIGMIR SQVRKSIYLE
SMLIALFGAV LGLVLGVLLG TSLVYALRDE GLGSVVVPWS TVLVMLVASA FVGVGAAILP
AIRASRTPPL AAIAEG
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