Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_0356 |
Symbol | |
ID | 9154491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 373284 |
End bp | 374729 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | fumarate lyase |
Protein accession | YP_003645338 |
Protein GI | 296138095 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGCATGA CCGAAACCAC CCGCAGCGAG CACGACCTGC TCGGCGACAT CGACGTTCCC GCCGACGCGT ACTACGGCGC CCACACCGCG CGCGCGTTGC TGAACTTCCC GATCACCGGC ATCCCGATCG CCACCCACAC CCACCTGGTG AACGCGCTGG CATGCGTGAA ACAAGCTGCT GCCGAGGCTA ACCGGCAGCT CGGCGTACTC ACTGACGAGC GCACCGAGGC GATCGTCGCA GCGTGCGAGC GGATCCGCGG CGGCGGTCTA CACGAGTGGT TCGTGGTGGA CACCATCGCC GGCGGCGCCG GAACCTCGAC CAACATGAAC GCCAACGAGG TGATCGCCAA CGCCGCGCTC GAGGAACTCG GCCGGCCACG CGGCGACTAC GCCACACTGC ACCCGCTCGA TCACGTGAAT CTGGGGCAGA GCACCAATGA CGTGTATCCG ACGGCGATCA AGATCGCGCT GATCACCCAG CTGCGCGACC TGCAAGAGGC GCTCACCGGG CTACGCGCCG AATTCGCCGC GAAATCAGAA GAATTCGGCG GGATCGTGAA GATGGGCCGA ACCCAGTTGC AGGACGCCGT TCCGATGACA TTGGGCCAGG AGTTCGGCGC GTTCGCGACC ACGCTGGGCG AGGACATCGT GCGTCTGCAG GAGGCCACCC GATTGCTGCA CGAGCTGAAC ATCGGCGGCA CGGCGATCGG CACGGCCCTC AATTCGCACC CCGGCTACCG CGCCAAAGTG ATCGAGCGGC TACGCGAGAT CACCGGCATC TACGAACTGG TGGGCGCCTC CGACCTGATC GAGGCGACCG CCGATGTCGG CGTCTTCGTC CAGCTCTCGG GTGTGCTGAA GCGGATCGCG GTCAAGCTCT CCAAGACGTG TAACGACCTG CGGCTGTTGT CCTCCGGGCC GCGGGCGGGT CTCAACGAGA TCCACCTGCC CGCGGTGCAG GCCGGATCGT CGATCATGCC GGGCAAGGTG AACCCGGTGA TCCCCGAGGT GGTGAACCAG ATCGCCTACG AGGTGATCGG GCACGACGTG ACGATCACGA TGGCTGCCGA AGGCGGCCAG CTCCAGCTCA ACGCCTTCGA GCCGATCATC GCGCGATCGC TGGTCGAGTC GATCGCGCAC CTGACCCGCG GGGCGCGCGT GCTCGGCGAG CGGTGCGTCG CCGGGATCAC CGCCAACACG GCGCGACTGG AGCAGTCGGT CGCCGAGTCG ATCGGTGTGG TCACCGCCCT GAGCCCGAGC ATCGGCTATG CCGCGGCGAC CGCGGTGGCC GCCCAGGCGC TCGAGGAAGG ACGAGGCGTG GTGGAGATCG TGCGCGAGCG CGGACTGTTG GACGAGGCCA CCCTGGATTC GCTCCTGAGC CCCGAGTACC TCACCGGGCA CCCGCCGCAC GCGCTGCACC CGGGGTCCGC GGAGAAGCAC GACTGA
|
Protein sequence | MGMTETTRSE HDLLGDIDVP ADAYYGAHTA RALLNFPITG IPIATHTHLV NALACVKQAA AEANRQLGVL TDERTEAIVA ACERIRGGGL HEWFVVDTIA GGAGTSTNMN ANEVIANAAL EELGRPRGDY ATLHPLDHVN LGQSTNDVYP TAIKIALITQ LRDLQEALTG LRAEFAAKSE EFGGIVKMGR TQLQDAVPMT LGQEFGAFAT TLGEDIVRLQ EATRLLHELN IGGTAIGTAL NSHPGYRAKV IERLREITGI YELVGASDLI EATADVGVFV QLSGVLKRIA VKLSKTCNDL RLLSSGPRAG LNEIHLPAVQ AGSSIMPGKV NPVIPEVVNQ IAYEVIGHDV TITMAAEGGQ LQLNAFEPII ARSLVESIAH LTRGARVLGE RCVAGITANT ARLEQSVAES IGVVTALSPS IGYAAATAVA AQALEEGRGV VEIVRERGLL DEATLDSLLS PEYLTGHPPH ALHPGSAEKH D
|
| |