| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0342 |
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| Symbol | |
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| ID | 9154477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 354669 |
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| End bp | 356861 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein |
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| Protein accession | YP_003645324 |
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| Protein GI | 296138081 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGACA ACATGATTCG CTGGGAGCAG GACGCCGACG GCATCGTCAC GCTGACGATG
GACGATCCGA ACAGCTCCGC GAACACGATG AACGAGCTGT ACGGCACCTC GATGCGGGCC
ACCGTGGATC GCCTCGAGGC CGAGGTCGAC AGCATCACCG GTGTCGTGCT CACCTCCGCG
AAGAAGACCT TCTTCGCCGG TGGCAACCTG ACCGAGATCC GCAAGGCCAC CAAGGCCGAT
GCGCAGCAGG TCTTCGACAA CGTCCAGGAG ATCAAGAAGG ATCTGCGCCG CCTGGAGAAG
CTGCCCAAGC CCGTCGTGGC CGCCATCAAC GGCGCCGCTC TGGGCGGTGG CCTGGAGATC
GCCCTGGCCG CCAACCACCG CATCGCGGCG GACGTCAAGG GCAGCAAGAT CGGCCTTCCC
GAGGTCAGCC TCGGCCTGCT CCCCGGTGGT GGCGGCGTGA CCCGCACCGT GCGGATGCTG
GGCCTGCAGG GCGCTCTCAT GGGCGTGCTG CTCCAGGGGC AGCAGATGGC TCCGGGCAAG
GCCCAGAAGA CCGGCCTGGT GAACGATCTG GTCGGCACCG TCGAGGAGCT CGTCCCCGCC
GCGAAGGCGT GGATCAAGGC GAACCCCGAG GCCGCGACGC AGCCGTGGGA TGTCAAGGGA
CACCGCATCC CCGGTGGCTC GCCGATCGAC AAGACGCTGG CCCCCAACGC CCCGGCGTTC
CCGGCCAACC TGCGCAAGCA GCTCAAGGGT GCGCCCATGC CCGCACCGGA GGCCATCATG
GCCGCCGCCT TCGAGGGCAC CTACGTCGAC TTCGACACCG CGCTCGAGAT CGAGTCGCGC
TACTTCACCA AGCTGGCCAC CGGTCAGGTG TCGAAGAACA TGATCAAGGC GTTCTTCTTC
GATCTGCAGC ACATCAACGG TGGCGGTAGC CGTCCCGATG GGTACGAGAA GTACCAGGCC
AAGAAGGTCG GCGTGATCGG CGCCGGCATG ATGGGCGCGG CCATCGCGTA CGTCTCGGCG
AAGGCCGGTA TCGAGGTGGT CCTCAAGGAC ATCGATCAGG CCGCCGCGGA TCGCGGTAAG
GACTACAGCG TCAAGCTGGA GGAGAAGGCG CTCGCCAAGG GTCGCACCAC TCAGGAGAAG
TCCGACGCCC TGCTCGCCCG CATCCACCCG ACCGTGGATC CGCAGGACTT CGCGGGTGTC
GATCTCGTCA TCGAGGCCGC GTTCGAGTCC GTCGAGGTCA AGAACAAGGT CTTCCAGGAG
ATCGAGGACA TCGTCGAACC CGACGCCATC CTGGGCTCGA ACACCTCGAC CCTGCCGATC
ACCATCCTCG CCGAGGGCGT CAAGCGCTCC GAGGACTTCA TCGGCATCCA CTTCTTCTCC
CCCGTGGACA AGATGCCCCT GGTCGAGATC ATCAAGGGCG AGAAGACCTC CGACGCCGTG
CTGGCCAAGG TGATCGACTA CACCCTGCAG ATCAAGAAGA CCCCGATCGT GGTGCACGAC
AGCCGCGGCT TCTTCACCTC CCGTGTGATC GGCACCTTCA TCAACGAGGC GCTCGCCGCC
ATCGGTGAGG GCGTCGACCC GGTGTACCTG GAGCAGGCGG GCCAGCAGGC CGGCTACCCG
GCCGCGCCGC TGCAGCTGAC GGACGAGCTC ACGCTCACCC TGATGCAGAA GATCCGCAAG
GCCACCGAGG ATGCGCTCAC CGCTGAGGGC AAGCCGGTTC CGCAGCACGG TGCCTTCGCC
GTGGTCGACT GGATGGTCGA GAACGGCCGC ACCTCCAAGA AGGACGGTGC GGGCTTCTAC
GACTACGCCG ACGGTAAGCG CACCGGCCTG TGGAAGGGCT TCCAGGAGCA CTTCAAGTCG
GGCAGTGTGA CGCCGGACTT CGCCGAGCTC CAGGAGCGCA TGCTGTTCAT CGAGTCGATC
GAGACCGTGC GCTGCTTCGA CGAGGGCGTG CTGGAGTCGG TCGCGGATGC CAACATCGGC
TCCATCTTCG GCATCGGCTT CCCCGCGTGG ACCGGTGGCG TGCTGCAGTA CATCAACGGC
TACGAGGGCC GCCCGGGGAC GCCCGCCGAG GGCCTCACCG GTCCGAAGGC CTTCGTCGCG
CAGGCGAACG CCCTGGCGGC CAAGTACGGC GAGCAGTTCA CCCCGCCGGA GTCGCTGGTG
GCCAAGGCTG AGGCGGGCGA GACCTACGAG TAG
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| Protein sequence | MSDNMIRWEQ DADGIVTLTM DDPNSSANTM NELYGTSMRA TVDRLEAEVD SITGVVLTSA
KKTFFAGGNL TEIRKATKAD AQQVFDNVQE IKKDLRRLEK LPKPVVAAIN GAALGGGLEI
ALAANHRIAA DVKGSKIGLP EVSLGLLPGG GGVTRTVRML GLQGALMGVL LQGQQMAPGK
AQKTGLVNDL VGTVEELVPA AKAWIKANPE AATQPWDVKG HRIPGGSPID KTLAPNAPAF
PANLRKQLKG APMPAPEAIM AAAFEGTYVD FDTALEIESR YFTKLATGQV SKNMIKAFFF
DLQHINGGGS RPDGYEKYQA KKVGVIGAGM MGAAIAYVSA KAGIEVVLKD IDQAAADRGK
DYSVKLEEKA LAKGRTTQEK SDALLARIHP TVDPQDFAGV DLVIEAAFES VEVKNKVFQE
IEDIVEPDAI LGSNTSTLPI TILAEGVKRS EDFIGIHFFS PVDKMPLVEI IKGEKTSDAV
LAKVIDYTLQ IKKTPIVVHD SRGFFTSRVI GTFINEALAA IGEGVDPVYL EQAGQQAGYP
AAPLQLTDEL TLTLMQKIRK ATEDALTAEG KPVPQHGAFA VVDWMVENGR TSKKDGAGFY
DYADGKRTGL WKGFQEHFKS GSVTPDFAEL QERMLFIESI ETVRCFDEGV LESVADANIG
SIFGIGFPAW TGGVLQYING YEGRPGTPAE GLTGPKAFVA QANALAAKYG EQFTPPESLV
AKAEAGETYE
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