Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_0279 |
Symbol | |
ID | 9154414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 287593 |
End bp | 288501 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | Integrase catalytic region |
Protein accession | YP_003645267 |
Protein GI | 296138024 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACCGCT TCCAGTTCGT TGAGGACCAC AAGGACGCCT ACGGCGTGAA GCGGTTGTGC CAGGTGATTG GGATCGCGCG GTCGTCGTTC TACGCGTGGC TCGCTGCAGC GCAGGGGCGG GCCGCGCGGA CGGCGGCTGA CTCGGTGCTG GCGGGCCGGA TCCGGGTGCT GCAAGACCCG AAACAGGGCG GGGATCGTGC TTACGGAGCG CCTCGGATCA CCGCTGACCT CAACGCCGGC GCAGCCGAGA GTGAGCGGGT CAACCACAAG CGCGTGGCGC GCGTGATGCG TGAGCACGGC CTGGCCGGAA TCCGGCTCCG CAAGCGTGTG AAGACAACCG TCCCGGATCA GTCCGGTCGA CGCTTCCCAG ATCTGATCGG CAGGAACTTC AGCACCGGCG GTCCTGGTCG CCGCTACGTC GGCGACATCA CCTACCTGCC CATCGCCGAC GGCAGCAACC TCTACCTCGC GTCGGTCATC GACCTGGGCT CACGCAAGCT GGCAGGCTGG TCGATGGCCA CTCACATGCG CACCGAGCTC GTCGAAAACG CACTACGGGC CGCGCAGCGC GAACGCGGCA CCCTGGCTGG GGCGATCTTT CACTCCGACC ACGGGTCGGT CTACACCTCG AAGGCCTACA CCGCCCTCTG CGAGCACTTC GGCGTGACCC AGTCGATGGG AGCGATCGGC TCGTCCGCGG ACAACGCCCT CGCTGAGAGC TTCAACGCGA CCCTCAAACG CGAACTCCTC CAAGGCCGAC CAGCGTTCGG CGACCAGGCC ACGGCCTACC GGGCCGTGTT CCGGTGGGCC AACCGCTACA ACACCCGCCG CCGGCACTCC GCGATCGGCA ACATCACACC AAACACCTAC GAAACCGCCT ACCGCGCTAC GCTCACGCAA GCGGCATAA
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Protein sequence | MNRFQFVEDH KDAYGVKRLC QVIGIARSSF YAWLAAAQGR AARTAADSVL AGRIRVLQDP KQGGDRAYGA PRITADLNAG AAESERVNHK RVARVMREHG LAGIRLRKRV KTTVPDQSGR RFPDLIGRNF STGGPGRRYV GDITYLPIAD GSNLYLASVI DLGSRKLAGW SMATHMRTEL VENALRAAQR ERGTLAGAIF HSDHGSVYTS KAYTALCEHF GVTQSMGAIG SSADNALAES FNATLKRELL QGRPAFGDQA TAYRAVFRWA NRYNTRRRHS AIGNITPNTY ETAYRATLTQ AA
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